HHsearch alignment for GI: 254780711 and conserved domain: cd03218
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=95.14 E-value=0.016 Score=39.41 Aligned_cols=54 Identities=30% Similarity=0.377 Sum_probs=39.7
Q ss_pred CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHH
Q ss_conf 000258841899623443334688999999998614895078205422100477999
Q gi|254780711|r 93 LDLNAPSPLVIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQLR 149 (461)
Q Consensus 93 l~~~~~~p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL~ 149 (461)
T Consensus 21 ~~v~~G--ei~~llGpNGAGKSTll~~i~Gl~~p~~G-~I~~~g~di~~~~~~~r~r 74 (232)
T cd03218 21 LSVKQG--EIVGLLGPNGAGKTTTFYMIVGLVKPDSG-KILLDGQDITKLPMHKRAR 74 (232)
T ss_pred EEECCC--CEEEEECCCCCCHHHHHHHHHCCCCCCCE-EEEECCEECCCCCHHHHHH
T ss_conf 798999--59999999996199999999779999862-9999999999999999997