HHsearch alignment for GI: 254780711 and conserved domain: cd03245
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=95.77 E-value=0.075 Score=34.35 Aligned_cols=44 Identities=25% Similarity=0.311 Sum_probs=28.8
Q ss_pred CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCC
Q ss_conf 002588418996234433346889999999986148950782054
Q gi|254780711|r 94 DLNAPSPLVIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLD 138 (461)
Q Consensus 94 ~~~~~~p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~D 138 (461)
T Consensus 24 sl~i~~G~~v~ivG~sGsGKSTLl~ll~gl~~p~~G~-I~i~g~~ 67 (220)
T cd03245 24 SLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGS-VLLDGTD 67 (220)
T ss_pred EEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCE-EEECCEE
T ss_conf 9998799999999999985999999996725478658-9999999