HHsearch alignment for GI: 254780711 and conserved domain: cd03249
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=95.22 E-value=0.14 Score=32.32 Aligned_cols=45 Identities=24% Similarity=0.431 Sum_probs=30.6
Q ss_pred CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCC
Q ss_conf 000258841899623443334688999999998614895078205422
Q gi|254780711|r 93 LDLNAPSPLVIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVH 140 (461)
Q Consensus 93 l~~~~~~p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~ 140 (461)
T Consensus 24 l~i~~G--~~iaIvG~sGsGKSTLl~ll~gl~~p~~G-~I~idg~~i~ 68 (238)
T cd03249 24 LTIPPG--KTVALVGSSGCGKSTVVSLLERFYDPTSG-EILLDGVDIR 68 (238)
T ss_pred EEECCC--CEEEEECCCCCCHHHHHHHHHHCCCCCCC-EEEECCEECC
T ss_conf 997699--99999999999899999998238618851-8999999923