HHsearch alignment for GI: 254780711 and conserved domain: cd03255
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=95.93 E-value=0.074 Score=34.40 Aligned_cols=63 Identities=17% Similarity=0.237 Sum_probs=39.6
Q ss_pred CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCC
Q ss_conf 0025884189962344333468899999999861489507820542210047799998510347
Q gi|254780711|r 94 DLNAPSPLVIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQLRYLGEQIQV 157 (461)
Q Consensus 94 ~~~~~~p~vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL~~~a~~~~v 157 (461)
T Consensus 24 sl~i~~Ge~~~iiG~sGsGKTTll~~i~Gl~~p~~G-~I~~~g~~i~~~~~~~~~~~rr~~Ig~ 86 (218)
T cd03255 24 SLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSG-EVRVDGTDISKLSEKELAAFRRRHIGF 86 (218)
T ss_pred EEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCE-EEEECCEECCCCCHHHHHHHHHCCEEE
T ss_conf 899869989999999998699999999669999964-999999998879989999986504789