HHsearch alignment for GI: 254780711 and conserved domain: pfam00142
>pfam00142 Fer4_NifH 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family.
Probab=98.27 E-value=1.5e-05 Score=62.50 Aligned_cols=166 Identities=20% Similarity=0.184 Sum_probs=84.7
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCH------------HHHHHHHHH-------------HCCC
Q ss_conf 899623443334688999999998614895078205422100------------477999985-------------1034
Q gi|254780711|r 102 VIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPA------------AQEQLRYLG-------------EQIQ 156 (461)
Q Consensus 102 vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~a------------A~eQL~~~a-------------~~~~ 156 (461)
T Consensus 2 ~iai~GKGGVGKTTtsvNLA~aLA~-~GkrVlliDaD~~~~~~~~llg~~~~~~l~d~l~~~~~~~~~~~~~vi~~~~~g 80 (269)
T pfam00142 2 KIAIYGKGGIGKSTTSQNTSAALAE-MGKKVLIVGCDPKADSTRLILGGKAQPTIIDTLREKGLVEDVELEDVVKKGYGG 80 (269)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHH-CCCEEEEECCCCCCCCHHHHCCCCCCCCHHHHHCCCCCCCCCCHHHHEECCCCC
T ss_conf 5899899976889999999999998-799099984589987414443898888478776046770224074501337787
Q ss_pred CCCCCCCC---CCHHH-HHHHHHHHHHHH----CCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHC--C
Q ss_conf 74222332---10368-999999999974----15886998334422211246899999985138511000310111--2
Q gi|254780711|r 157 VDTLEVIP---EQSPE-KIAIRATQSARD----GGYDAVILDTAGRNHINDSLMQEISEIKSLTNPHEILLVADALT--G 226 (461)
Q Consensus 157 v~~~~~~~---~~dp~-~i~~~a~~~a~~----~~~D~iiiDTaGR~~~d~~lm~El~~i~~~~~p~e~~lV~da~~--G 226 (461)
T Consensus 81 v~~i~~~~~e~~~~~~~~~~~~~~~~l~~~~~~~~~DyiliD~~g~~~~~~~-----~~~i~~~~A~~viiv~t~E~~al 155 (269)
T pfam00142 81 IRCVESGGPEPGVGCAGRGVITAIDLLEELGAYDDLDFVLYDVLGDVVCGGF-----AMPIREGKAQEVYIVTSGEMMAL 155 (269)
T ss_pred CEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCHHCCCEEEEECCCCEEECCC-----CCCHHHCCCCEEEEEECCCHHHH
T ss_conf 2688689986563211078999999999821021288898533674024340-----05334435887999828947899
Q ss_pred HHHHHHHHH---HHHH--CCCCCEEEEECCCCCCCCHHHHHHHHHCCCHHHEEC
Q ss_conf 256888898---8763--584407764115766330367778884787302615
Q gi|254780711|r 227 QDAVHLARN---FDKI--VDLTGIILTRMDGDGRGGAALSMRTVTGKPIKAIGT 275 (461)
Q Consensus 227 q~a~~~a~~---F~~~--~~i~giIlTKlD~~akgG~als~~~~~~~PI~fig~ 275 (461)
T Consensus 156 ~~a~~l~~~i~~~~~~~~~~i~giv~n~~~~~~~~~~~~~~~~~~~--~~~lg~ 207 (269)
T pfam00142 156 YAANNICKGILKYAKSGGVRLGGLICNSRKVDDERELIDAFAEALG--TQMIHF 207 (269)
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHC--CCEEEE
T ss_conf 9999999999998505796278998268654115799999999819--947997