HHsearch alignment for GI: 254780711 and conserved domain: pfam02421
>pfam02421 FeoB_N Ferrous iron transport protein B. Escherichia coli has an iron(II) transport system (feo) which may make an important contribution to the iron supply of the cell under anaerobic conditions. FeoB has been identified as part of this transport system. FeoB is a large 700-800 amino acid integral membrane protein. The N terminus contains a P-loop motif suggesting that iron transport may be ATP dependent.
Probab=96.83 E-value=0.003 Score=44.96 Aligned_cols=144 Identities=22% Similarity=0.300 Sum_probs=73.3
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 89962344333468899999999861489507820542210047799998510347422233210368999999999974
Q gi|254780711|r 102 VIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQLRYLGEQIQVDTLEVIPEQSPEKIAIRATQSARD 181 (461)
Q Consensus 102 vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL~~~a~~~~v~~~~~~~~~dp~~i~~~a~~~a~~ 181 (461)
T Consensus 1 tVaIvG~PNvGKSTLlN~L~g-------~~~-~Vs-~~--pGt-------------Tr-------d~~~------~~~~~ 43 (188)
T pfam02421 1 TIALVGNPNVGKTTLFNALTG-------ARQ-HVG-NW--PGV-------------TV-------EKKE------GTFKY 43 (188)
T ss_pred CEEEECCCCCCHHHHHHHHHC-------CCC-EEE-CC--CCC-------------CC-------CEEE------EEEEE
T ss_conf 989988999899999999959-------996-563-89--997-------------23-------3357------68752
Q ss_pred CCCCEEEEECCCCCCCHHHHHHHHH--HHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHH-HCCCCCEEEEECCCCCCCCH
Q ss_conf 1588699833442221124689999--99851385110003101112256888898876-35844077641157663303
Q gi|254780711|r 182 GGYDAVILDTAGRNHINDSLMQEIS--EIKSLTNPHEILLVADALTGQDAVHLARNFDK-IVDLTGIILTRMDGDGRGGA 258 (461)
Q Consensus 182 ~~~D~iiiDTaGR~~~d~~lm~El~--~i~~~~~p~e~~lV~da~~Gq~a~~~a~~F~~-~~~i~giIlTKlD~~akgG~ 258 (461)
T Consensus 44 ~~~~~~lvDTpGi~~~~~~~~~e~v~~~~~~~~~aDlvl~vvDa~~~er~l~l~~~l~~~~~p-~IvVlNK~Dl~~~~~~ 122 (188)
T pfam02421 44 KGYEIEIVDLPGTYSLSPYSEEEKVARDYLLEEKPDVIINVVDATNLERNLYLTLQLLELGIP-VVVALNMMDEAEKKGI 122 (188)
T ss_pred CCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCC-EEEEECCCHHCCCCCC
T ss_conf 516799996888501465327899999998623687369997676245448999999976998-8999617020100365
Q ss_pred HH---HHHHHHCCCHHHEE--CCCCCCCCC
Q ss_conf 67---77888478730261--586723210
Q gi|254780711|r 259 AL---SMRTVTGKPIKAIG--TGEKINDLE 283 (461)
Q Consensus 259 al---s~~~~~~~PI~fig--~GE~~~dle 283 (461)
T Consensus 123 ~~~~~~l~~~lg~~vi~ISA~~g~Gi~eL~ 152 (188)
T pfam02421 123 KIDIKKLSELLGVPVVPTSARKGEGIDELK 152 (188)
T ss_pred HHHHHHHHHHCCCCEEEEEEECCCCHHHHH
T ss_conf 203999998739968999931699999999