HHsearch alignment for GI: 254780711 and conserved domain: pfam02881

>pfam02881 SRP54_N SRP54-type protein, helical bundle domain.
Probab=98.18  E-value=2.8e-06  Score=68.14  Aligned_cols=56  Identities=27%  Similarity=0.447  Sum_probs=47.8

Q ss_pred             CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             989999999999999985246969999999999999830311126998999999999999
Q gi|254780711|r   23 SETDISNTLREIRRTFLEADVSLEVVQSFSKRVQEKAKGEKILRSIQPGQMVIKIVHDEL   82 (461)
Q Consensus        23 ~e~~i~~~l~ei~~aLLeaDV~~~vv~~~~~~Ik~k~~~~~~~~~~~~~~~i~kiv~~eL   82 (461)
T Consensus        22 ~~~~i~~~l~ele~~Li~aDvg~~~~~~ii~~l~~~~~----~~~~~~~~~i~~~l~e~L   77 (77)
T pfam02881        22 GEKKIDELLEELEEALLEADVGVETTEKIIERLKELVG----RKGLSDPEEIKKALKEEL   77 (77)
T ss_pred             CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH----HCCCCCHHHHHHHHHHHC
T ss_conf             89860899999999999812468999999999999998----717999999999999769