HHsearch alignment for GI: 254780711 and conserved domain: pfam05970
>pfam05970 DUF889 PIF1 helicase. The PIF1 helicase inhibits telomerase activity and is cell cycle regulated.
Probab=95.87 E-value=0.017 Score=39.35 Aligned_cols=110 Identities=16% Similarity=0.093 Sum_probs=64.3
Q ss_pred CCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHH-HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf 34433346889999999986148950782054221004779-99985103474222332103689999999999741588
Q gi|254780711|r 107 GLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQ-LRYLGEQIQVDTLEVIPEQSPEKIAIRATQSARDGGYD 185 (461)
Q Consensus 107 Gl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQ-L~~~a~~~~v~~~~~~~~~dp~~i~~~a~~~a~~~~~D 185 (461)
T Consensus 1 G~AGTGKS~ll~~i~~~l~~-~~~~v~-vtA~TGiAA~~i~gG~TiHs~~gi~~~~~--~~~~~~~~~~~~~~~~~~~~~ 76 (418)
T pfam05970 1 GYGGTGKTFLWNALSARIRS-RGKIVL-NVASSGIAALLLPGGRTAHSRFGIPLDID--EDSTCKIKRGSKLAELLKKAS 76 (418)
T ss_pred CCCCCCHHHHHHHHHHHHHH-CCCEEE-EECCHHHHHHCCCCCEEHHHCCCCCCCCC--CCCCEEECCCHHHHHHHHHCC
T ss_conf 97988799999999999976-898899-98968999851699873985269898877--420112133778899874087
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHCCC---C------CCCCCCC
Q ss_conf 69983344222112468999999851385---1------1000310
Q gi|254780711|r 186 AVILDTAGRNHINDSLMQEISEIKSLTNP---H------EILLVAD 222 (461)
Q Consensus 186 ~iiiDTaGR~~~d~~lm~El~~i~~~~~p---~------e~~lV~d 222 (461)
T Consensus 77 vLIIDEiSMv--~~~lfd~id~~lr~i~~~~~~~PFGGiqvIl~GD 120 (418)
T pfam05970 77 LIIWDEAPMT--HRHCFEALDRTLRDILKNTDDKPFGGKTVVLGGD 120 (418)
T ss_pred EEEEECCCCC--CHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC
T ss_conf 9998541135--7899999999999987127876779747998244