HHsearch alignment for GI: 254780711 and conserved domain: pfam10662
>pfam10662 PduV-EutP Ethanolamine utilisation - propanediol utilisation. Members of this family function in ethanolamine and propanediol degradation pathways, however the exact roles of these proteins is poorly understood.
Probab=96.28 E-value=0.023 Score=38.27 Aligned_cols=128 Identities=27% Similarity=0.332 Sum_probs=71.5
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 89962344333468899999999861489507820542210047799998510347422233210368999999999974
Q gi|254780711|r 102 VIMLVGLQGSGKTTTTAKIAYHLKTLKKKKILMASLDVHRPAAQEQLRYLGEQIQVDTLEVIPEQSPEKIAIRATQSARD 181 (461)
Q Consensus 102 vIllvGl~GsGKTTT~aKLA~~~~~~~~~kV~lv~~Dt~R~aA~eQL~~~a~~~~v~~~~~~~~~dp~~i~~~a~~~a~~ 181 (461)
T Consensus 3 kVaivGrpNvGKSTLlN~L~g-------~~i--~~~---K~----q--------tt------------------------ 34 (143)
T pfam10662 3 KIMLIGRSGCGKTTLTQALNG-------EEL--KYK---KT----Q--------AI------------------------ 34 (143)
T ss_pred EEEEECCCCCCHHHHHHHHCC-------CCE--EEC---CC----E--------EE------------------------
T ss_conf 599989999999999999759-------944--517---87----0--------79------------------------
Q ss_pred CCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHCCHHH--HHHHHHHHHHCCCCCEEEEECCCCCCCCHH
Q ss_conf 158869983344222112468999999851385110003101112256--888898876358440776411576633036
Q gi|254780711|r 182 GGYDAVILDTAGRNHINDSLMQEISEIKSLTNPHEILLVADALTGQDA--VHLARNFDKIVDLTGIILTRMDGDGRGGAA 259 (461)
Q Consensus 182 ~~~D~iiiDTaGR~~~d~~lm~El~~i~~~~~p~e~~lV~da~~Gq~a--~~~a~~F~~~~~i~giIlTKlD~~akgG~a 259 (461)
T Consensus 35 -~~~~~~IDTPG~~~~~~~~~~~~~~~~~--daDvil~vvDa~~~~~~~~~~~~~~~~k--pv-IlViNKiD~~~~~-~~ 107 (143)
T pfam10662 35 -EFSDNMIDTPGEYLENRRFYSALIVTAA--DADVIALVQDATEPWSVFPPGFASMFNK--PV-IGIITKIDLAKDE-AN 107 (143)
T ss_pred -EECCCEEECCCCCCCCHHHHHHHHHHHH--HCCEEEEEEECCCCCCCCCHHHHHHCCC--CE-EEEEECCCCCCCH-HH
T ss_conf -8557489998766562899999999996--4999999987788667568778975479--88-9999802245756-67
Q ss_pred HHHHH----HHCC-CHHHEE--CCCCCCCCCC
Q ss_conf 77788----8478-730261--5867232100
Q gi|254780711|r 260 LSMRT----VTGK-PIKAIG--TGEKINDLEN 284 (461)
Q Consensus 260 ls~~~----~~~~-PI~fig--~GE~~~dle~ 284 (461)
T Consensus 108 l~~~~~~~~~~~~~~i~~iSA~~g~Gid~L~~ 139 (143)
T pfam10662 108 IEMVEEWLNNAGAEKIFEVSAVTNEGIDELFA 139 (143)
T ss_pred HHHHHHHHHHCCCCEEEEEECCCCCCHHHHHH
T ss_conf 89999999758998799988989989999999