RPSBLAST alignment for GI: 254780711 and conserved domain: COG0541
>gnl|CDD|30887 COG0541, Ffh, Signal recognition particle GTPase [Intracellular trafficking and secretion]. Length = 451
Score = 546 bits (1408), Expect = e-156
Identities = 232/459 (50%), Positives = 317/459 (69%), Gaps = 9/459 (1%)
Query: 1 MFDNLQERLGSIFQNITGKGSLSETDISNTLREIRRTFLEADVSLEVVQSFSKRVQEKAK 60
MF++L +RL + + + GKG ++E D+ LREIRR LEADV+L+VV+ F KR++E+A
Sbjct: 1 MFESLSDRLSNALKKLRGKGRITEKDVKEALREIRRALLEADVNLKVVKDFIKRIKERAL 60
Query: 61 GEKILRSIQPGQMVIKIVHDELVEVLGKESIELDLNAPSPLVIMLVGLQGSGKTTTTAKI 120
GE++ + + PGQ IKIV++ELV++LG E+ EL+L P VI++VGLQGSGKTTT K+
Sbjct: 61 GEEVPKGLTPGQQFIKIVYEELVKLLGGENSELNLAKKPPTVILMVGLQGSGKTTTAGKL 120
Query: 121 AYHLKTLKKKKILMASLDVHRPAAQEQLRYLGEQIQVDTLEVIPEQSPEKIAIRATQSAR 180
A +LK K KK+L+ + D +RPAA EQL+ L EQ+ V E+ P +IA A + A+
Sbjct: 121 AKYLKK-KGKKVLLVAADTYRPAAIEQLKQLAEQVGVPFFGSGTEKDPVEIAKAALEKAK 179
Query: 181 DGGYDAVILDTAGRNHINDSLMQEISEIKSLTNPHEILLVADALTGQDAVHLARNFDKIV 240
+ GYD VI+DTAGR HI++ LM E+ EIK + NP E LLV DA+ GQDAV+ A+ F++ +
Sbjct: 180 EEGYDVVIVDTAGRLHIDEELMDELKEIKEVINPDETLLVVDAMIGQDAVNTAKAFNEAL 239
Query: 241 DLTGIILTRMDGDGRGGAALSMRTVTGKPIKAIGTGEKINDLENFFPDRIANRILGMGDV 300
+TG+ILT++DGD RGGAALS R +TGKPIK IGTGEKI+DLE F PDR A+RILGMGDV
Sbjct: 240 GITGVILTKLDGDARGGAALSARAITGKPIKFIGTGEKIDDLEPFHPDRFASRILGMGDV 299
Query: 301 VSLVEKAARNLNEKQAALTAKKIAKGKFDLEDLAEQFRQTQKIGGIGSILRMLPGMPSLK 360
+SL+EKA ++E++A A+K+ KGKF LED EQ Q +K+G + +L M+PGM +K
Sbjct: 300 LSLIEKAEEVVDEEEAEKLAEKLKKGKFTLEDFLEQLEQMKKMGPLSKLLSMIPGM-GMK 358
Query: 361 QNIMPSSFDDKTINHHIAIIASMTKEERANPSIIKHSRKKRIAAGSGTNAAKINKLLKLH 420
+ D+K + AII SMT EER NP II SRK+RIA GSGT+ +NKLLK
Sbjct: 359 DSDKDIELDEKKLKRIEAIIDSMTPEERENPDIINASRKRRIARGSGTSVQDVNKLLKQF 418
Query: 421 RQVAEMMHSTQGLGGNALTQQIMGRLKSKIGFGKNGRFP 459
+Q+ +MM G GG G++ + G+FP
Sbjct: 419 KQMKKMMKKMSGGGG-------KGKMMRGMKGMMGGKFP 450