HHsearch results for GI: 254780712 and protein with PDBid: 3bn0_A
>3bn0_A 30S ribosomal protein S16; ribonucleoprotein, ribosome; 2.00A {Aquifex aeolicus} SCOP: d.27.1.1
Probab=100.00 E-value=1e-40 Score=268.28 Aligned_cols=108 Identities=33% Similarity=0.557 Sum_probs=88.0
Q ss_pred CCCHHHHHHCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCEEEECHHHHHHHHHCCCCCCHHHHHHHHHC
Q ss_conf 93014123066878882799992067877684102221215678788864479739999999841983568999999972
Q gi|254780712|r 1 MTLKIRLACGGSKSRHHYRIVVANSRSPRDGKFIEKLGTWNPTLPKENPLRFTMNFERIQHWMSKGAQPTDRILFFLDKA 80 (116)
Q Consensus 1 M~vkIRL~r~G~k~rp~yrIVvadsr~~Rdgk~iE~lG~YnP~~~k~~~~~i~l~~eRi~yWL~~GAqpS~~V~~LL~~~ 80 (116)
|+|+|||+|+||||+|||||||+|||+||||+|||+||||||+ ++++|.||.|||+|||++||||||+|.+||+.+
T Consensus 1 MavkIRL~r~G~k~~p~yriVv~d~r~~rdgk~iE~lG~YnP~----~~~~i~l~~eri~~Wl~~GAqps~~V~~lL~~~ 76 (112)
T 3bn0_A 1 MAVRIRLAKFGRKHHPIYRIVVMDAKSPREGKYIDILGTYDPK----RKVLINVYPEKVKEWVLKGVELSHRAKAILWNH 76 (112)
T ss_dssp -CEEEEEEEEEETTEEEEEEEEEECC------CSEEEEEEETT----TTEEEEECHHHHHHHHHTTCEEEHHHHHHHHHT
T ss_pred CCEEEEHHCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEECCC----CCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHC
T ss_conf 9788703108888898578998436878899650232377587----642124689999999987897479999999985
Q ss_pred CCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 986668-00051122542889889999874303
Q gi|254780712|r 81 GLIKRS-PQNNPKKSQPKKKALERLASKKNADE 112 (116)
Q Consensus 81 Gl~~~~-~~~~~~~~~~~kk~~e~~~~kk~~~e 112 (116)
|+++.. +.....+.....+..++.++++.+.+
T Consensus 77 Gll~~~~~~~~~~k~~~~~~~~ek~~~~~~~~~ 109 (112)
T 3bn0_A 77 GILKEVVPEGYEMKRVGDYYVFEKRESKKSKGG 109 (112)
T ss_dssp THHHHHCCTTEEEEEETTEEEEEECC-------
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 986444544333243442100467999875341