HHsearch alignment of GI: 254780713 and MMDB domain: 2dyi_A_88-162

>2dyi_A (A:88-162) Probable 16S rRNA-processing protein RIMM; ribosomal protein S19, PRC-barrel, structural genomics, NPPSFA; 2.00A {Thermus thermophilus HB8} PDB: 2dog_A

Probab=99.82  E-value=2.1e-20  Score=134.35  Aligned_cols=70  Identities=23%  Similarity=0.439  Sum_probs=65.1

Q ss_pred             CCCHHHHHCCEEEEECCCEEEEEEEEEECCCCEEEEEECC-----CCCEEEEECHHHHCCEEECCCCEEEEECCCCCCC
Q ss_conf             0214524011367525843119988665799508999749-----9828998750310010563397999952810038
Q gi|254780713|r   97 EFFNTDLEEMETFDRQGKYWGQVCGVYNFGAGSILEIKNT-----MEKTFLIPFTKFAVLEVNLQENKILIDPIAAGLN  170 (190)
Q Consensus        97 e~Y~~dLiG~~V~d~~~~~iG~V~~v~~~~a~dil~V~~~-----~~ke~lIP~v~~~I~~ID~~~k~I~v~~p~Glld  170 (190)
                      ||||+||+||+|++ +|+.+|+|.+|+++||||+|+|+++     ++|++||||   +|.+||+++++|.|+||+||||
T Consensus         1 E~Y~~DLiGl~V~d-eg~~iG~V~~V~~~ga~dvl~I~~~~~~~~~~k~~lIP~---vV~~Vd~~~~~i~v~~peGLld   75 (75)
T 2dyi_A            1 RYYYFALIGLPVYV-EGRQVGEVVDILDAGAQDVLIIRGVGERLRDRAERLVPL---QAPYVRVEEGSIHVDPIPGLFD   75 (75)
T ss_dssp             CCCHHHHTTCEEEE-TTEEEEEEEEEEEETTEEEEEEEECCSSGGGSTTEEEET---TCTTEEECSSCEEECCCTTTCC
T ss_pred             CCHHHHHHHHHHCC-CCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCEEEEEC---CCCEEECCCCEEEEECCCCCCC
T ss_conf             40087776223022-444445898971159950999975875577996899545---4888956699999979997779