HHsearch alignment of GI: 254780713 and MMDB domain: 2qgg_A_103-182
>2qgg_A (A:103-182) 16S rRNA-processing protein RIMM; X-RAY, NESG, ASR73, structural genomics, PSI-2, protein structure initiative; 2.40A {Acinetobacter calcoaceticus}
Probab=99.87 E-value=2.1e-22 Score=145.56 Aligned_cols=72 Identities=22% Similarity=0.372 Sum_probs=68.2
Q ss_pred CCCHHHHHCCEEEE----ECCCEEEEEEEEEECCCCEEEEEECC----CCCEEEEECHHHHCCEEECCCCEEEEECCCCC
Q ss_conf 02145240113675----25843119988665799508999749----98289987503100105633979999528100
Q gi|254780713|r 97 EFFNTDLEEMETFD----RQGKYWGQVCGVYNFGAGSILEIKNT----MEKTFLIPFTKFAVLEVNLQENKILIDPIAAG 168 (190)
Q Consensus 97 e~Y~~dLiG~~V~d----~~~~~iG~V~~v~~~~a~dil~V~~~----~~ke~lIP~v~~~I~~ID~~~k~I~v~~p~Gl 168 (190)
||||+|||||+|+| .+|+.+|+|.+|+++||||+|+|+++ ++|++||||+++||.+||.++|+|.|+||+||
T Consensus 1 EfY~~dLiG~~V~d~~~~e~g~~lG~V~~v~~~ga~dvl~I~~~~~~~~gk~~LIPfv~~~V~~VD~~~~~I~v~~peG~ 80 (80)
T 2qgg_A 1 EYYWSDLKGLTVLGLDDEEQEVNLGQIHELFETGANDVXVVRATPDSIDSEERXIPWHKDVVQRVDLEAGRIYVNWGVDY 80 (80)
T ss_dssp HCCHHHHTTCEEEEECTTSCEEEEEEEEEEEECSSCEEEEEECCSSSSSSCCEEEECCTTTEEEEETTTTEEEESCCCC-
T ss_pred CEEHHHHEEEEEEECCCCCCCEEEEEEEEEECCCCCEEEEEEECCCCCCCCEEEEECCHHCCCEEECCCCEEEEECCCCC
T ss_conf 24434301028996236647739999988842799429999705768899599998654303879778999999189999