HHsearch alignment of GI: 254780713 and MMDB domain: 3h9n_A_1-93
>3h9n_A (A:1-93) Ribosome maturation factor RIMM; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Haemophilus influenzae}
Probab=99.85 E-value=1e-21 Score=141.68 Aligned_cols=89 Identities=20% Similarity=0.344 Sum_probs=79.5
Q ss_pred CEEEEEEEECCCEEEEEEEEEECCCCHHHHHHCCEE----CCCCEEEEEEEEEEECCEEEEEECCCCCHHHHHHHCCCEE
Q ss_conf 079999994463050599999418997787630102----0798379999999739979999638778455676349687
Q gi|254780713|r 6 KLVLMATIGTTHGLNGEVYIDSYANNPIDLNRYVLY----SNDNRELRILKMYRKNKRFIATFSGIDNIHSASELRDLKL 81 (190)
Q Consensus 6 ~~i~iGkI~k~hGlkGevki~~~td~~~~~~~~~~~----~~~~~~~~i~~~~~~~~~~iikf~gi~s~~~A~~l~g~~i 81 (190)
||+.+|+|++|||+|||+|++|+|++|+.+.++..+ .....++.+++++.+++.++++|++|+||++|++|+|+.+
T Consensus 1 d~i~iG~I~~~hGikG~vkv~~~td~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~~i~kf~~i~~~~~A~~l~g~~i 80 (93)
T 3h9n_A 1 HIEVVGKLGSTYGIRGWLRIYSSTEQAESIFDYQPWFLKIKGEWQSIELENWRYHNHEIIVKLKGVDDREAAQILANVEI 80 (93)
T ss_dssp CEEEEEEEEEECSSSSCEEEEECSSSSGGGGGCCSEEEEETTEEEEECEEEEEESSSCEEEEESSCCSHHHHHTTTTCEE
T ss_pred CEEEEEEEECCEEECEEEEEEECCCCHHHHHCCCCEEEECCCCCEEEEEEEEEECCCEEEEEECCCCCHHHHHHHHHHEE
T ss_conf 95999999099951669999997899899727883786037983166789999809879999648897668988654210
Q ss_pred EECHHHCCCCCCCCC
Q ss_conf 741777886556410
Q gi|254780713|r 82 YAKRQDFKDEELEED 96 (190)
Q Consensus 82 ~i~~~~lp~~~l~~~ 96 (190)
|+++++|| +|++|
T Consensus 81 ~i~~~~lp--~l~eG 93 (93)
T 3h9n_A 81 GVDLSVFP--ELEEG 93 (93)
T ss_dssp EEECCCCC--CCSSS
T ss_pred EHHHHCCC--CCCCC
T ss_conf 00022044--54345