HHsearch results for GI: 254780713 and protein with PDBid: 2qgg_A

>2qgg_A 16S rRNA-processing protein RIMM; X-RAY, NESG, ASR73, structural genomics, PSI-2, protein structure initiative; 2.40A {Acinetobacter calcoaceticus}
Probab=100.00  E-value=0  Score=289.94  Aligned_cols=164  Identities=16%  Similarity=0.321  Sum_probs=148.1

Q ss_pred             CCCCEEEEEEEECCCEEEEEEEEEECCCCHHHHHHCCEEC--C--CCEEEEEEEEEEECCEEEEEECCCCCHHHHHHHCC
Q ss_conf             8200799999944630505999994189977876301020--7--98379999999739979999638778455676349
Q gi|254780713|r    3 KLDKLVLMATIGTTHGLNGEVYIDSYANNPIDLNRYVLYS--N--DNRELRILKMYRKNKRFIATFSGIDNIHSASELRD   78 (190)
Q Consensus         3 k~~~~i~iGkI~k~hGlkGevki~~~td~~~~~~~~~~~~--~--~~~~~~i~~~~~~~~~~iikf~gi~s~~~A~~l~g   78 (190)
                      ..++|+.||+|++|||+||+++|+++|++++.+.++..+.  .  ...++.+++++.++++++++|+|++||++|+.|+|
T Consensus         7 ~ped~i~iG~I~~~hGlkGevkv~~~td~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~k~~gi~~r~~Ae~l~g   86 (182)
T 2qgg_A            7 VPEDRIQIGQLRSAYGLNGWLWVYSNTEPMSNMFDYLPWYIETKAGWQTVDVKRWKPHGKGLVVSLKGVSDRTGAESLVA   86 (182)
T ss_dssp             CCSSEEEEEEEEEEETTTTEEEEEECSSSGGGGGGSSSEEEEETTEEEEECEEEEEEETTEEEEEETTCCSHHHHHTTTT
T ss_pred             CCCCEEEEEEEECCEEECEEEEEEECCCCHHHHHCCCEEEEEECCCEEEEEEEEEEECCCEEEEEECCCCCHHHHHHHHC
T ss_conf             97578999999098941779999996889899608771999715980799999999706479999669899999988519


Q ss_pred             CEEEECHHHCCCCCCCCCCCCHHHHHCCEEEEEC----CCEEEEEEEEEECCCCEEEEEECC----CCCEEEEECHHHHC
Q ss_conf             6877417778865564100214524011367525----843119988665799508999749----98289987503100
Q gi|254780713|r   79 LKLYAKRQDFKDEELEEDEFFNTDLEEMETFDRQ----GKYWGQVCGVYNFGAGSILEIKNT----MEKTFLIPFTKFAV  150 (190)
Q Consensus        79 ~~i~i~~~~lp~~~l~~~e~Y~~dLiG~~V~d~~----~~~iG~V~~v~~~~a~dil~V~~~----~~ke~lIP~v~~~I  150 (190)
                      +.+|+++++||  +|+++||||+|||||+|++.+    |+.+|+|++|+++||||+|+|++.    ++||+||||+++||
T Consensus        87 ~~l~i~~~~lp--~l~~~e~y~~dLiG~~V~~~~~~e~g~~lG~V~~v~~~ga~dll~V~~~~~~~~~ke~lIP~~~~~V  164 (182)
T 2qgg_A           87 SNIWIAKSQLP--KADVDEYYWSDLKGLTVLGLDDEEQEVNLGQIHELFETGANDVMVVRATPDSIDSEERMIPWHKDVV  164 (182)
T ss_dssp             CEEEEETTCCC--CCHHHHCCHHHHTTCEEEEECTTSCEEEEEEEEEEEECSSCEEEEEECCSSSSSSCCEEEECCTTTE
T ss_pred             CEEEEEHHHCC--CCCCCCEEHHHHCCCEEEECCCCCCCCEEEEEEEEECCCCCEEEEEEECCCCCCCCEEEEECCHHCC
T ss_conf             78995132388--8788929858837869995456656858899999803799139999715778999599998663102


Q ss_pred             CEEECCCCEEEEECCCCC
Q ss_conf             105633979999528100
Q gi|254780713|r  151 LEVNLQENKILIDPIAAG  168 (190)
Q Consensus       151 ~~ID~~~k~I~v~~p~Gl  168 (190)
                      .+||+++|+|+||+|+++
T Consensus       165 ~~ID~~~k~I~Vd~p~d~  182 (182)
T 2qgg_A          165 QRVDLEAGRIYVNWGVDY  182 (182)
T ss_dssp             EEEETTTTEEEESCCCC-
T ss_pred             CEEECCCCEEEEECCCCC
T ss_conf             879778999999189999