HHsearch results for GI: 254780713 and protein with PDBid: 3h9n_A
>3h9n_A Ribosome maturation factor RIMM; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Haemophilus influenzae}
Probab=100.00 E-value=0 Score=295.78 Aligned_cols=165 Identities=22% Similarity=0.341 Sum_probs=150.3
Q ss_pred EEEEEEEECCCEEEEEEEEEECCCCHHHHHHCCEE----CCCCEEEEEEEEEEECCEEEEEECCCCCHHHHHHHCCCEEE
Q ss_conf 79999994463050599999418997787630102----07983799999997399799996387784556763496877
Q gi|254780713|r 7 LVLMATIGTTHGLNGEVYIDSYANNPIDLNRYVLY----SNDNRELRILKMYRKNKRFIATFSGIDNIHSASELRDLKLY 82 (190)
Q Consensus 7 ~i~iGkI~k~hGlkGevki~~~td~~~~~~~~~~~----~~~~~~~~i~~~~~~~~~~iikf~gi~s~~~A~~l~g~~i~ 82 (190)
+-.||+|++|||+|||++++++|++|+.+.++..+ .....++.+++++.++++++++|+|++||++|++|+|+.+|
T Consensus 2 ~~VIGkI~~~hGlkGevkv~~~td~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~ivk~~gi~~r~~Ae~l~g~~l~ 81 (177)
T 3h9n_A 2 IEVVGKLGSTYGIRGWLRIYSSTEQAESIFDYQPWFLKIKGEWQSIELENWRYHNHEIIVKLKGVDDREAAQILANVEIG 81 (177)
T ss_dssp EEEEEEEEEECSSSSCEEEEECSSSSGGGGGCCSEEEEETTEEEEECEEEEEESSSCEEEEESSCCSHHHHHTTTTCEEE
T ss_pred CEEEEEEECCEECCEEEEEEECCCCHHHHHCCCCEEEECCCCEEEEEEEEEEECCCEEEEEECCCCCHHHHHHHHHCEEE
T ss_conf 29999991999518899999967998997188818971599689999999997299899999877998999974102440
Q ss_pred ECHHHCCCCCCCCCCCCHHHHHCCEEEEECCCEEEEEEEEEECCCCEEEEEECC-----CCCEEEEECH-HHHCCEEECC
Q ss_conf 417778865564100214524011367525843119988665799508999749-----9828998750-3100105633
Q gi|254780713|r 83 AKRQDFKDEELEEDEFFNTDLEEMETFDRQGKYWGQVCGVYNFGAGSILEIKNT-----MEKTFLIPFT-KFAVLEVNLQ 156 (190)
Q Consensus 83 i~~~~lp~~~l~~~e~Y~~dLiG~~V~d~~~~~iG~V~~v~~~~a~dil~V~~~-----~~ke~lIP~v-~~~I~~ID~~ 156 (190)
++++++| +++++||||+||+||+|+|.+|+.+|+|.+|+++||||+|+|+++ ++||+||||+ ++||.+||.+
T Consensus 82 i~~~~lp--~l~e~e~y~~dLiG~~V~d~~g~~lG~V~~v~~~~a~dll~V~~~~~~~~~~ke~LIPfv~~~~V~~ID~~ 159 (177)
T 3h9n_A 82 VDLSVFP--ELEEGDYYWHDLIGCTVVNLEGYTMGTVTEMMETGSNDVLVVKANTKDAFGKQERLIPFLYEQVVKRVDLT 159 (177)
T ss_dssp EECCCCC--CCSSSCGGGGGTTTCEEEETTCCEEEEEEEEEESSSCEEEEEECCTTCTTCCSEEEEECCBTTTEEEEEGG
T ss_pred CCHHHCC--CCCCCCEEHHHHCCCEEEECCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCEEEECC
T ss_conf 4877976--54577455256468499966896057993981069923999992886677983899733752575079778
Q ss_pred CCEEEEECCCCCCCCCC
Q ss_conf 97999952810038886
Q gi|254780713|r 157 ENKILIDPIAAGLNNTT 173 (190)
Q Consensus 157 ~k~I~v~~p~Glld~~~ 173 (190)
+|+|+|+||+||||+..
T Consensus 160 ~k~I~v~~peGlld~~~ 176 (177)
T 3h9n_A 160 TKTIEVDWDAGFLEHHH 176 (177)
T ss_dssp GTEEEECCCSSTTCCCC
T ss_pred CCEEEEECCCCHHHCCC
T ss_conf 99999989803655167