HHsearch results for GI: 254780713 and protein with PDBid: 3h9n_A

>3h9n_A Ribosome maturation factor RIMM; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Haemophilus influenzae}
Probab=100.00  E-value=0  Score=295.78  Aligned_cols=165  Identities=22%  Similarity=0.341  Sum_probs=150.3

Q ss_pred             EEEEEEEECCCEEEEEEEEEECCCCHHHHHHCCEE----CCCCEEEEEEEEEEECCEEEEEECCCCCHHHHHHHCCCEEE
Q ss_conf             79999994463050599999418997787630102----07983799999997399799996387784556763496877
Q gi|254780713|r    7 LVLMATIGTTHGLNGEVYIDSYANNPIDLNRYVLY----SNDNRELRILKMYRKNKRFIATFSGIDNIHSASELRDLKLY   82 (190)
Q Consensus         7 ~i~iGkI~k~hGlkGevki~~~td~~~~~~~~~~~----~~~~~~~~i~~~~~~~~~~iikf~gi~s~~~A~~l~g~~i~   82 (190)
                      +-.||+|++|||+|||++++++|++|+.+.++..+    .....++.+++++.++++++++|+|++||++|++|+|+.+|
T Consensus         2 ~~VIGkI~~~hGlkGevkv~~~td~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~ivk~~gi~~r~~Ae~l~g~~l~   81 (177)
T 3h9n_A            2 IEVVGKLGSTYGIRGWLRIYSSTEQAESIFDYQPWFLKIKGEWQSIELENWRYHNHEIIVKLKGVDDREAAQILANVEIG   81 (177)
T ss_dssp             EEEEEEEEEECSSSSCEEEEECSSSSGGGGGCCSEEEEETTEEEEECEEEEEESSSCEEEEESSCCSHHHHHTTTTCEEE
T ss_pred             CEEEEEEECCEECCEEEEEEECCCCHHHHHCCCCEEEECCCCEEEEEEEEEEECCCEEEEEECCCCCHHHHHHHHHCEEE
T ss_conf             29999991999518899999967998997188818971599689999999997299899999877998999974102440


Q ss_pred             ECHHHCCCCCCCCCCCCHHHHHCCEEEEECCCEEEEEEEEEECCCCEEEEEECC-----CCCEEEEECH-HHHCCEEECC
Q ss_conf             417778865564100214524011367525843119988665799508999749-----9828998750-3100105633
Q gi|254780713|r   83 AKRQDFKDEELEEDEFFNTDLEEMETFDRQGKYWGQVCGVYNFGAGSILEIKNT-----MEKTFLIPFT-KFAVLEVNLQ  156 (190)
Q Consensus        83 i~~~~lp~~~l~~~e~Y~~dLiG~~V~d~~~~~iG~V~~v~~~~a~dil~V~~~-----~~ke~lIP~v-~~~I~~ID~~  156 (190)
                      ++++++|  +++++||||+||+||+|+|.+|+.+|+|.+|+++||||+|+|+++     ++||+||||+ ++||.+||.+
T Consensus        82 i~~~~lp--~l~e~e~y~~dLiG~~V~d~~g~~lG~V~~v~~~~a~dll~V~~~~~~~~~~ke~LIPfv~~~~V~~ID~~  159 (177)
T 3h9n_A           82 VDLSVFP--ELEEGDYYWHDLIGCTVVNLEGYTMGTVTEMMETGSNDVLVVKANTKDAFGKQERLIPFLYEQVVKRVDLT  159 (177)
T ss_dssp             EECCCCC--CCSSSCGGGGGTTTCEEEETTCCEEEEEEEEEESSSCEEEEEECCTTCTTCCSEEEEECCBTTTEEEEEGG
T ss_pred             CCHHHCC--CCCCCCEEHHHHCCCEEEECCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCEEEECC
T ss_conf             4877976--54577455256468499966896057993981069923999992886677983899733752575079778


Q ss_pred             CCEEEEECCCCCCCCCC
Q ss_conf             97999952810038886
Q gi|254780713|r  157 ENKILIDPIAAGLNNTT  173 (190)
Q Consensus       157 ~k~I~v~~p~Glld~~~  173 (190)
                      +|+|+|+||+||||+..
T Consensus       160 ~k~I~v~~peGlld~~~  176 (177)
T 3h9n_A          160 TKTIEVDWDAGFLEHHH  176 (177)
T ss_dssp             GTEEEECCCSSTTCCCC
T ss_pred             CCEEEEECCCCHHHCCC
T ss_conf             99999989803655167