HHSEARCH alignment of GI: 254780713 and SCOP domain: d1rzhh1

Alignment
>d1rzhh1 b.41.1.1 (H:36-248) Photosynthetic reaction centre {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=96.82  E-value=0.0016  Score=37.18  Aligned_cols=58  Identities=16%  Similarity=0.260  Sum_probs=44.0

Q ss_pred             HHHHCCEEEEECCCEEEEEEEEE-ECCCC--EEEEEECCCCCEEEEECHHHHCCEEECCCCEEEEE
Q ss_conf             52401136752584311998866-57995--08999749982899875031001056339799995
Q gi|254780713|r  101 TDLEEMETFDRQGKYWGQVCGVY-NFGAG--SILEIKNTMEKTFLIPFTKFAVLEVNLQENKILID  163 (190)
Q Consensus       101 ~dLiG~~V~d~~~~~iG~V~~v~-~~~a~--dil~V~~~~~ke~lIP~v~~~I~~ID~~~k~I~v~  163 (190)
                      .|++|+.|++.+|+.+|+|.+++ +...+  -.|+|++..++++|+|+.-.   .++  ...+.|.
T Consensus       111 ~DprG~~V~~~DG~kIGtV~DvwvD~~e~~vRYleV~tgggk~vLvP~~~a---~i~--~d~V~V~  171 (213)
T d1rzhh1         111 KNPIGLPVRGCDLEIAGKVVDIWVDIPEQMARFLEVELKDGSTRLLPMQMV---KVQ--SNRVHVN  171 (213)
T ss_dssp             CCCTTCEEEETTSCEEEEEEEEEEETTTTEEEEEEEECTTSCEEEEEGGGC---EEC--SSCEEES
T ss_pred             CCCCCCEEECCCCCCCEEEEEEEEECCCCCEEEEEEEECCCCEEEECHHHE---EEC--CCEEEEC
T ss_conf             885678438689985307889999788785889999928985897034525---866--9928983


SCOP domain information

class: All beta proteins
fold: PRC-barrel domain
superfamily: PRC-barrel domain
family: Photosynthetic reaction centre, H-chain, cytoplasmic domain
domain: Photosynthetic reaction centre
species: Rhodobacter sphaeroides [TaxId: 1063]