RPSBLAST alignment for GI: 254780713 and conserved domain: COG0806

>gnl|CDD|31149 COG0806, RimM, RimM protein, required for 16S rRNA processing [Translation, ribosomal structure and biogenesis]. Length = 174

 Score =  125 bits (316), Expect = 6e-30
 Identities = 57/176 (32%), Positives = 88/176 (50%), Gaps = 8/176 (4%)

Query: 1   MVKLDKLVLMATIGTTHGLNGEVYIDSYANNPIDLNRY--VLYSNDNRELRILKM---YR 55
           M K + L+L+  I +THG+ GEV + S+ + P  L  Y   L      E + L +    +
Sbjct: 1   MTKPENLLLVGKIVSTHGIRGEVRVKSFTDFPESLFDYGPWLLLKPGGEWQELTVESVRK 60

Query: 56  KNKRFIATFSGIDNIHSASELRDLKLYAKRQDFKDEELEEDEFFNTDLEEMETFDRQGKY 115
                I  F GID+ ++A  L+  +++  R +    ELEEDEF+  DL  +E     G+ 
Sbjct: 61  HKNLLILKFKGIDDRNAAEALKGYEIFVDRSEL--PELEEDEFYYHDLIGLEVVTEDGEL 118

Query: 116 WGQVCGVYNFGAGSILEIKN-TMEKTFLIPFTKFAVLEVNLQENKILIDPIAAGLN 170
            G+V  +   GA  +L +K    +K  LIPF    V EV+L+  KI +DP    L+
Sbjct: 119 LGKVTEILETGANDVLVVKAKGGKKERLIPFVDAVVKEVDLEAKKIEVDPDEGLLD 174