RPSBLAST alignment of GI: 254780713 and protein with PDBid: 2qgg

>2qgg_A 16S rRNA-processing protein RIMM; X-RAY, NESG, ASR73, structural genomics, PSI-2, protein structure initiative; 2.40A {Acinetobacter calcoaceticus} Length = 182

 Score = 97.1 bits (241), Expect = 2e-21
 Identities = 27/172 (15%), Positives = 72/172 (41%), Gaps = 14/172 (8%)

Query: 5   DKLVLMATIGTTHGLNGEVYIDSYANNPIDL----NRYVLYSNDNRELRILKMYRKNKRF 60
           +  + +  + + +GLNG +++ S      ++      Y+      + + + +     K  
Sbjct: 9   EDRIQIGQLRSAYGLNGWLWVYSNTEPMSNMFDYLPWYIETKAGWQTVDVKRWKPHGKGL 68

Query: 61  IATFSGIDNIHSASELRDLKLYAKRQDFKDEELEEDEFFNTDLEEMETFD----RQGKYW 116
           + +  G+ +   A  L    ++  +        + DE++ +DL+ +         Q    
Sbjct: 69  VVSLKGVSDRTGAESLVASNIWIAKSQLPKA--DVDEYYWSDLKGLTVLGLDDEEQEVNL 126

Query: 117 GQVCGVYNFGAGSILEIKNTME----KTFLIPFTKFAVLEVNLQENKILIDP 164
           GQ+  ++  GA  ++ ++ T +    +  +IP+ K  V  V+L+  +I ++ 
Sbjct: 127 GQIHELFETGANDVMVVRATPDSIDSEERMIPWHKDVVQRVDLEAGRIYVNW 178