HHsearch alignment for GI: 254780714 and conserved domain: PRK00026
>PRK00026 trmD tRNA (guanine-N(1)-)-methyltransferase; Reviewed.
Probab=100.00 E-value=0 Score=760.37 Aligned_cols=226 Identities=51% Similarity=0.866 Sum_probs=221.0
Q ss_pred EEEEEEEECHHHHHHHHCCCHHHHHHHCCCEEEEEECCHHHCCCCCCEEEECCCCCCCCEEEECHHHHHHHHHHHHHCCC
Q ss_conf 45899851835644564033679999749659999602563589851353113068886177505889999987531147
Q gi|254780714|r 3 FHASILTLYPEMFPGHLEKSVAGKALACNLWSMDAIQIRNFSTDRHHSVDDTPAGGGAGMVLRVDILGKAIDHAVSQYTH 82 (236)
Q Consensus 3 Mki~IITlFPe~f~~~l~~sIigkA~~~gli~i~~~dlRdfs~~kh~~VDD~PyGGG~GMVlk~epi~~ai~~~~~~~~~ 82 (236)
T Consensus 1 Mki~iiTlFPe~f~~~l~~siigrA~~~~~i~i~~~nlRdf~~~kh~~VDD~PyGGG~GMVm~~epl~~ai~~i~~~--~ 78 (226)
T PRK00026 1 MRIDVLTLFPEMFRAPLDDSILGRAVEKGLLELEVWNPRDFTTDKHRTVDDRPYGGGAGMVMKPQPLFDAIDAAKAA--R 78 (226)
T ss_pred CEEEEEEECHHHHHHHHHCCHHHHHHHCCCEEEEEECHHHCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHC--C
T ss_conf 97899998857533253342799999869669998784660789887647875789982176308999999998741--8
Q ss_pred CCCCEEEECCCCCEECHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCEEEHHEEECCCCHHHHHHHHHHHHHHCCC
Q ss_conf 78308998799876048999997302875999415011448999740453100334011173277999999999850574
Q gi|254780714|r 83 EDIPRILMSPRGKTLTQKRVRQLSQKLGVIIVCGRFEGIDERIIEARDLEEISVGDYILSGGEPAALILLDAVVRLLPGV 162 (236)
Q Consensus 83 ~~~~vI~lSP~Gk~l~Q~~a~~ls~~~~liliCGrYEGiDeRvid~~~d~eiSiGDyVLsGGEl~a~v~~dai~RlipGv 162 (236)
T Consensus 79 ~~~~vI~lSP~G~~~~Q~~a~~ls~~~~liliCGrYEGiDeRvi~~~vd~eiSiGDyVLsGGEl~A~v~iDai~RllPGV 158 (226)
T PRK00026 79 GYAKVIYLSPQGKPFTQADAKELAKEEHLIFLCGRYEGIDERVIELYVDEEISIGDYVLSGGELAALVLIDAVVRLLPGV 158 (226)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCEEEEEECEEECCCHHHHHHHHHHHHHHCCCC
T ss_conf 99749987999888448889988669987999546033628999850655876304885184499999999999857886
Q ss_pred CCCCCCCCCCCHHCCCCCCCCCCCHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHH
Q ss_conf 67822233440114884621116725408988984341899899999999999999987686268630
Q gi|254780714|r 163 LGNQQSTIHESFENGLLEFPQYTRPQIWEGLAIPPILNSGDHERIKKWRKEQSFALTKKHRPDLLSKK 230 (236)
Q Consensus 163 lg~~~S~~~eSf~~~lLe~P~YTrP~~~~g~~VP~VLlSGnH~~I~~Wr~~~s~~~T~~~RPDL~~~~ 230 (236)
T Consensus 159 lgn~~S~~~eSF~~glLe~P~YTrP~~~~g~~VPeVLlSGnH~~I~~Wr~~~s~~~T~~~RPDL~~k~ 226 (226)
T PRK00026 159 LGNEESAEEDSFSDGLLECPHYTRPEEFRGLKVPEVLLSGNHAKIRRWRLEQSLERTKLRRPDLLEKL 226 (226)
T ss_pred CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHC
T ss_conf 68800200201323788898779942128999994024799799999999999999987695778539