HHsearch alignment of GI: 254780714 and MMDB domain: 1vh0_A_
>1vh0_A (A:) Hypothetical UPF0247 protein SAV0024/SA0023; structural genomics, unknown function; 2.31A {Staphylococcus aureus}
Probab=94.22 E-value=0.089 Score=32.89 Aligned_cols=137 Identities=15% Similarity=0.251 Sum_probs=89.3
Q ss_pred CCEEEEEEEEC---HHHHHHHHCCCHHHHHHHCCCEEEEEECCHHHCCCCCCEEEECCCCCCCCEEEECHHHHHH----H
Q ss_conf 95458998518---3564456403367999974965999960256358985135311306888617750588999----9
Q gi|254780714|r 1 MTFHASILTLY---PEMFPGHLEKSVAGKALACNLWSMDAIQIRNFSTDRHHSVDDTPAGGGAGMVLRVDILGKA----I 73 (236)
Q Consensus 1 M~Mki~IITlF---Pe~f~~~l~~sIigkA~~~gli~i~~~dlRdfs~~kh~~VDD~PyGGG~GMVlk~epi~~a----i 73 (236)
|+|+|.|+++= +.++..-.+. -.+| =+....++++.+.+--..+..+ .-.+... -
T Consensus 1 ~~Mki~Ii~vGk~~~~~~~~~i~e-Y~kR--l~~~~~~e~~ei~~~k~~~~~~---------------~~~~~~~~~~E~ 62 (161)
T 1vh0_A 1 MSLKITILAVGKLKEKYWKQAIAE-YEKR--LGPYTKIDIIEVPDEKAPENMS---------------DKEIEQVKEKEG 62 (161)
T ss_dssp --CEEEEEEESCCCCHHHHHHHHH-HHHH--HGGGSEEEEEEECCCCCCSSCC---------------HHHHHHHHHHHH
T ss_pred CCCEEEEEEECCCCCHHHHHHHHH-HHHH--CCCCCCEEEEEECCCCCCCCCC---------------HHHHHHHHHHHH
T ss_conf 934799999627596799999999-9987--4742482489953545643323---------------544999999988
Q ss_pred HHHHHHCCCCCCCEEEECCCCCEECHHHHHH-HHH-----CCCEEEEECCCHHHHHHHHHHCCCCCEEEHHEEECCCCHH
Q ss_conf 9875311477830899879987604899999-730-----2875999415011448999740453100334011173277
Q gi|254780714|r 74 DHAVSQYTHEDIPRILMSPRGKTLTQKRVRQ-LSQ-----KLGVIIVCGRFEGIDERIIEARDLEEISVGDYILSGGEPA 147 (236)
Q Consensus 74 ~~~~~~~~~~~~~vI~lSP~Gk~l~Q~~a~~-ls~-----~~~liliCGrYEGiDeRvid~~~d~eiSiGDyVLsGGEl~ 147 (236)
+.+.++. .++..+|.|.+.|+.++-....+ +.+ ..+++|+-|==.|+++.+... ++.-+|++...++ -+++
T Consensus 63 ~~il~~l-~~~~~vi~LD~~Gk~~sS~efA~~i~~~~~~g~~~i~F~IGG~~G~~~~~~~r-a~~~lSlS~mTfp-H~la 139 (161)
T 1vh0_A 63 QRILAKI-KPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSNGLHKDVLQR-SNYALSFSKMTFP-HQMM 139 (161)
T ss_dssp HHHHHTS-CTTSEEEEEEEEEECCCHHHHHHHHHHHHHTTCCEEEEEECBTTBCCHHHHHH-CSEEECSCSSCCC-HHHH
T ss_pred HHHHHHC-CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHH-HHHEEECCCCCCC-HHHH
T ss_conf 9999861-89983899742545678699999999999734785499946866568789987-6560302126662-8999
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999985
Q gi|254780714|r 148 ALILLDAVVRL 158 (236)
Q Consensus 148 a~v~~dai~Rl 158 (236)
.++++|-+-|-
T Consensus 140 rliL~EQiYRA 150 (161)
T 1vh0_A 140 RVVLIEQVYRA 150 (161)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
T ss_conf 99999999999