HHsearch alignment of GI: 254780714 and MMDB domain: 3knu_A_1-188
>3knu_A (A:1-188) TRNA (guanine-N(1)-)-methyltransferase; niaid, ssgcid, seattle structural genomics center for infectious disease; 2.25A {Anaplasma phagocytophilum HZ}
Probab=100.00 E-value=0 Score=541.57 Aligned_cols=168 Identities=46% Similarity=0.880 Sum_probs=163.5
Q ss_pred CEEEEEEEECHHHHHHHHCCCHHHHHHHCCCEEEEEECCHHHCCCCCCEEEECCCCCCCCEEEECHHHHHHHHHHHHHCC
Q ss_conf 54589985183564456403367999974965999960256358985135311306888617750588999998753114
Q gi|254780714|r 2 TFHASILTLYPEMFPGHLEKSVAGKALACNLWSMDAIQIRNFSTDRHHSVDDTPAGGGAGMVLRVDILGKAIDHAVSQYT 81 (236)
Q Consensus 2 ~Mki~IITlFPe~f~~~l~~sIigkA~~~gli~i~~~dlRdfs~~kh~~VDD~PyGGG~GMVlk~epi~~ai~~~~~~~~ 81 (236)
.|+|+|+|||||||++++++||+|||+++|+|++++||+|||+.||||+|||+||||||||||||||+++|+++++++
T Consensus 21 ~M~i~vlTLFPe~f~~~l~~si~grA~~~gl~~i~~~n~Rdf~~dkhr~VDD~PyGGG~GMvmk~ePi~~al~~~~~~-- 98 (188)
T 3knu_A 21 SMIFNVLTIFPQMFPGPLGVSNLGSALKKGLWTLNVFDIRAFANNKHNTVDDTPYGGGPGMLLRADVLGRCIDEVLSL-- 98 (188)
T ss_dssp CEEEEEEESCGGGCSGGGGSHHHHHHHHHTSEEEEEEEGGGGC-----CCEECCTTCCSSCEECHHHHHHHHHHHHHH--
T ss_pred CEEEEEEEECHHHHHHHHHCCHHHHHHHCCCEEEEEECHHHCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHC--
T ss_conf 549999998857613030051899999869668998881553789997775565789987255669999999987622--
Q ss_pred CCCCCEEEECCCCCEECHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCEEEHHEEECCCCHHHHHHHHHHHHHHCC
Q ss_conf 77830899879987604899999730287599941501144899974045310033401117327799999999985057
Q gi|254780714|r 82 HEDIPRILMSPRGKTLTQKRVRQLSQKLGVIIVCGRFEGIDERIIEARDLEEISVGDYILSGGEPAALILLDAVVRLLPG 161 (236)
Q Consensus 82 ~~~~~vI~lSP~Gk~l~Q~~a~~ls~~~~liliCGrYEGiDeRvid~~~d~eiSiGDyVLsGGEl~a~v~~dai~RlipG 161 (236)
.++.+||||||||++|||++|++||++++|+|||||||||||||+|+++|+|||||||||||||+||||++||++||+||
T Consensus 99 ~~~~~vi~lSP~Gk~f~Q~~a~eLa~~~~liliCGrYEGiDeRv~e~~vdeEiSIGDyVLsGGElaAmvliDav~RliPG 178 (188)
T 3knu_A 99 HPNTKLMFTSPRGVSFTQDIARQTMNFDNITLLCGRFEGIDERVVDFYKLQEVSIGDYVLSGGELAAMVIIDTCVRMVPG 178 (188)
T ss_dssp CTTCEEEEEEEEEEECCHHHHHHHHTCSEEEEEECCTTCBCHHHHHHHTCEEEESSSSCCSSSHHHHHHHHHHHHTTSTT
T ss_pred CCCCEEEEECCCCCCCCEEEEEECCCCCCEEEEEECEEEECHHHHHCCCCCEEEECCEEEECCCCEEEEHHHHHHHHCCC
T ss_conf 78865998358985201300000125773699971301000344513565156403689845761143217889874777
Q ss_pred CCCCCCCCCC
Q ss_conf 4678222334
Q gi|254780714|r 162 VLGNQQSTIH 171 (236)
Q Consensus 162 vlg~~~S~~~ 171 (236)
||||++|+++
T Consensus 179 VLg~~~S~~E 188 (188)
T 3knu_A 179 VIGNAESLKQ 188 (188)
T ss_dssp TC--------
T ss_pred CCCCCCCCCH
T ss_conf 6766554410