HHsearch results for GI: 254780714 and protein with PDBid: 1ns5_A

>1ns5_A Hypothetical protein YBEA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.68A {Escherichia coli} SCOP: c.116.1.3
Probab=94.25  E-value=0.064  Score=32.84  Aligned_cols=135  Identities=13%  Similarity=0.180  Sum_probs=84.7

Q ss_pred             EEEEEEEEC---HHHHHHHHCCCHHHHHHHCCCEEEEEECCHHHCCCCCCEEEECCCCCCCCEEEECHHHHHHHHHHHHH
Q ss_conf             458998518---35644564033679999749659999602563589851353113068886177505889999987531
Q gi|254780714|r    3 FHASILTLY---PEMFPGHLEKSVAGKALACNLWSMDAIQIRNFSTDRHHSVDDTPAGGGAGMVLRVDILGKAIDHAVSQ   79 (236)
Q Consensus         3 Mki~IITlF---Pe~f~~~l~~sIigkA~~~gli~i~~~dlRdfs~~kh~~VDD~PyGGG~GMVlk~epi~~ai~~~~~~   79 (236)
                      |+|.|+++=   |..+....+.- .+| + +..+.++.+.+++-...++..++              ....+.-+.+.+.
T Consensus         1 Mki~Ii~vGk~~~~~~~~~i~~Y-~kR-l-~~~~~~~~ie~~~~~~~~~~~~~--------------~~~~~E~~~il~~   63 (155)
T 1ns5_A            1 MKLQLVAVGTKMPDWVQTGFTEY-LRR-F-PKDMPFELIEIPAGKRGKNADIK--------------RILDKEGEQMLAA   63 (155)
T ss_dssp             CCEEEEEECSCCCHHHHHHHHHH-HTT-S-CTTSCEEEEEECCCCCCTTCCHH--------------HHHHHHHHHHHHH
T ss_pred             CEEEEEEECCCCCHHHHHHHHHH-HHH-C-CCCCCEEEEEECCCCCCCCCCHH--------------HHHHHHHHHHHHH
T ss_conf             96999997374967999999999-997-4-86677379994686677630499--------------9999999999974


Q ss_pred             CCCCCCCEEEECCCCCEECHHH-HHHHHH----CCCEEEEECCCHHHHHHHHHHCCCCCEEEHHEEECCCCHHHHHHHHH
Q ss_conf             1477830899879987604899-999730----28759994150114489997404531003340111732779999999
Q gi|254780714|r   80 YTHEDIPRILMSPRGKTLTQKR-VRQLSQ----KLGVIIVCGRFEGIDERIIEARDLEEISVGDYILSGGEPAALILLDA  154 (236)
Q Consensus        80 ~~~~~~~vI~lSP~Gk~l~Q~~-a~~ls~----~~~liliCGrYEGiDeRvid~~~d~eiSiGDyVLsGGEl~a~v~~da  154 (236)
                      ..  +..+|.|...|+.++-.. |+.+.+    ..+++|+-|==+|+|+.+... ++..+|+|+.+++ -|++.++++|-
T Consensus        64 ~~--~~~~I~LDe~Gk~lsS~~fA~~l~~~~~~g~~i~fiIGGa~G~~~~~~~~-a~~~lSls~mT~p-H~larv~l~EQ  139 (155)
T 1ns5_A           64 AG--KNRIVTLDIPGKPWDTPQLAAELERWKLDGRDVSLLIGGPEGLSPACKAA-AEQSWSLSALTLP-HPLVRVLVAES  139 (155)
T ss_dssp             HT--TSEEEEEEEEEECCCHHHHHHHHHHHHHHCSCEEEEECBTTBCCHHHHHH-CSEEECCCSSCCC-HHHHHHHHHHH
T ss_pred             CC--CCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHH-HCCEEECCCCCCC-HHHHHHHHHHH
T ss_conf             89--98589967899615789999999999965998799996787558899985-1958867799985-89999999999


Q ss_pred             HHHH
Q ss_conf             9985
Q gi|254780714|r  155 VVRL  158 (236)
Q Consensus       155 i~Rl  158 (236)
                      +-|-
T Consensus       140 lYRa  143 (155)
T 1ns5_A          140 LYRA  143 (155)
T ss_dssp             HHHH
T ss_pred             HHHH
T ss_conf             9999