HHsearch results for GI: 254780714 and protein with PDBid: 1ns5_A
>1ns5_A Hypothetical protein YBEA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.68A {Escherichia coli} SCOP: c.116.1.3
Probab=94.25 E-value=0.064 Score=32.84 Aligned_cols=135 Identities=13% Similarity=0.180 Sum_probs=84.7
Q ss_pred EEEEEEEEC---HHHHHHHHCCCHHHHHHHCCCEEEEEECCHHHCCCCCCEEEECCCCCCCCEEEECHHHHHHHHHHHHH
Q ss_conf 458998518---35644564033679999749659999602563589851353113068886177505889999987531
Q gi|254780714|r 3 FHASILTLY---PEMFPGHLEKSVAGKALACNLWSMDAIQIRNFSTDRHHSVDDTPAGGGAGMVLRVDILGKAIDHAVSQ 79 (236)
Q Consensus 3 Mki~IITlF---Pe~f~~~l~~sIigkA~~~gli~i~~~dlRdfs~~kh~~VDD~PyGGG~GMVlk~epi~~ai~~~~~~ 79 (236)
|+|.|+++= |..+....+.- .+| + +..+.++.+.+++-...++..++ ....+.-+.+.+.
T Consensus 1 Mki~Ii~vGk~~~~~~~~~i~~Y-~kR-l-~~~~~~~~ie~~~~~~~~~~~~~--------------~~~~~E~~~il~~ 63 (155)
T 1ns5_A 1 MKLQLVAVGTKMPDWVQTGFTEY-LRR-F-PKDMPFELIEIPAGKRGKNADIK--------------RILDKEGEQMLAA 63 (155)
T ss_dssp CCEEEEEECSCCCHHHHHHHHHH-HTT-S-CTTSCEEEEEECCCCCCTTCCHH--------------HHHHHHHHHHHHH
T ss_pred CEEEEEEECCCCCHHHHHHHHHH-HHH-C-CCCCCEEEEEECCCCCCCCCCHH--------------HHHHHHHHHHHHH
T ss_conf 96999997374967999999999-997-4-86677379994686677630499--------------9999999999974
Q ss_pred CCCCCCCEEEECCCCCEECHHH-HHHHHH----CCCEEEEECCCHHHHHHHHHHCCCCCEEEHHEEECCCCHHHHHHHHH
Q ss_conf 1477830899879987604899-999730----28759994150114489997404531003340111732779999999
Q gi|254780714|r 80 YTHEDIPRILMSPRGKTLTQKR-VRQLSQ----KLGVIIVCGRFEGIDERIIEARDLEEISVGDYILSGGEPAALILLDA 154 (236)
Q Consensus 80 ~~~~~~~vI~lSP~Gk~l~Q~~-a~~ls~----~~~liliCGrYEGiDeRvid~~~d~eiSiGDyVLsGGEl~a~v~~da 154 (236)
.. +..+|.|...|+.++-.. |+.+.+ ..+++|+-|==+|+|+.+... ++..+|+|+.+++ -|++.++++|-
T Consensus 64 ~~--~~~~I~LDe~Gk~lsS~~fA~~l~~~~~~g~~i~fiIGGa~G~~~~~~~~-a~~~lSls~mT~p-H~larv~l~EQ 139 (155)
T 1ns5_A 64 AG--KNRIVTLDIPGKPWDTPQLAAELERWKLDGRDVSLLIGGPEGLSPACKAA-AEQSWSLSALTLP-HPLVRVLVAES 139 (155)
T ss_dssp HT--TSEEEEEEEEEECCCHHHHHHHHHHHHHHCSCEEEEECBTTBCCHHHHHH-CSEEECCCSSCCC-HHHHHHHHHHH
T ss_pred CC--CCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHH-HCCEEECCCCCCC-HHHHHHHHHHH
T ss_conf 89--98589967899615789999999999965998799996787558899985-1958867799985-89999999999
Q ss_pred HHHH
Q ss_conf 9985
Q gi|254780714|r 155 VVRL 158 (236)
Q Consensus 155 i~Rl 158 (236)
+-|-
T Consensus 140 lYRa 143 (155)
T 1ns5_A 140 LYRA 143 (155)
T ss_dssp HHHH
T ss_pred HHHH
T ss_conf 9999