HHsearch results for GI: 254780714 and protein with PDBid: 1vh0_A
>1vh0_A Hypothetical UPF0247 protein SAV0024/SA0023; structural genomics, unknown function; 2.31A {Staphylococcus aureus} SCOP: c.116.1.3
Probab=97.25 E-value=0.0019 Score=42.93 Aligned_cols=140 Identities=14% Similarity=0.280 Sum_probs=92.1
Q ss_pred CCEEEEEEEE--C-HHHHHHHHCCCHHHHHHHCCCEEEEEECCHHHCCCCCCEEEECCCCCCCCEEEECH-HHHHHHHHH
Q ss_conf 9545899851--8-35644564033679999749659999602563589851353113068886177505-889999987
Q gi|254780714|r 1 MTFHASILTL--Y-PEMFPGHLEKSVAGKALACNLWSMDAIQIRNFSTDRHHSVDDTPAGGGAGMVLRVD-ILGKAIDHA 76 (236)
Q Consensus 1 M~Mki~IITl--F-Pe~f~~~l~~sIigkA~~~gli~i~~~dlRdfs~~kh~~VDD~PyGGG~GMVlk~e-pi~~ai~~~ 76 (236)
|.|+|.|+++ . +..+...++. -.+|- ++.+.++.+.+.+-...++..--+ .+ ...+--+.+
T Consensus 1 m~Mki~Ii~iGk~k~~~~~~~i~~-Y~kRl--~~~~~i~~~el~~~k~~~~~~~~~------------~~~~~~~E~~~i 65 (161)
T 1vh0_A 1 MSLKITILAVGKLKEKYWKQAIAE-YEKRL--GPYTKIDIIEVPDEKAPENMSDKE------------IEQVKEKEGQRI 65 (161)
T ss_dssp --CEEEEEEESCCCCHHHHHHHHH-HHHHH--GGGSEEEEEEECCCCCCSSCCHHH------------HHHHHHHHHHHH
T ss_pred CCCEEEEEEECCCCCHHHHHHHHH-HHHHC--CCCCCEEEEEECCCCCCCCCCHHH------------HHHHHHHHHHHH
T ss_conf 913799999647397799999999-99965--843583699955766754445332------------999999999999
Q ss_pred HHHCCCCCCCEEEECCCCCEECHHH-HHHHHH-----CCCEEEEECCCHHHHHHHHHHCCCCCEEEHHEEECCCCHHHHH
Q ss_conf 5311477830899879987604899-999730-----2875999415011448999740453100334011173277999
Q gi|254780714|r 77 VSQYTHEDIPRILMSPRGKTLTQKR-VRQLSQ-----KLGVIIVCGRFEGIDERIIEARDLEEISVGDYILSGGEPAALI 150 (236)
Q Consensus 77 ~~~~~~~~~~vI~lSP~Gk~l~Q~~-a~~ls~-----~~~liliCGrYEGiDeRvid~~~d~eiSiGDyVLsGGEl~a~v 150 (236)
.++. .++..+|.|.+.|+.++-.. |+.+.+ ..+++|+-|==+|+++-+.+. .++.+|+|+..++- |+|.++
T Consensus 66 l~~i-~~~~~~I~LDe~Gk~~sS~~fA~~i~~~~~~g~~~i~FiIGGa~G~~~~~~~~-a~~~lSls~mTfpH-~lar~~ 142 (161)
T 1vh0_A 66 LAKI-KPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSNGLHKDVLQR-SNYALSFSKMTFPH-QMMRVV 142 (161)
T ss_dssp HHTS-CTTSEEEEEEEEEECCCHHHHHHHHHHHHHTTCCEEEEEECBTTBCCHHHHHH-CSEEECSCSSCCCH-HHHHHH
T ss_pred HHHH-CCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHH-CCCEEECCCCCCCH-HHHHHH
T ss_conf 9861-89987999958988888699999999999749974899946875548799985-38878756898748-999999
Q ss_pred HHHHHHHH
Q ss_conf 99999985
Q gi|254780714|r 151 LLDAVVRL 158 (236)
Q Consensus 151 ~~dai~Rl 158 (236)
++|-+-|-
T Consensus 143 l~EQlYRa 150 (161)
T 1vh0_A 143 LIEQVYRA 150 (161)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
T ss_conf 99999999