HHSEARCH alignment of GI: 254780714 and SCOP domain: d2v3ka1

Alignment
>d2v3ka1 c.116.1.6 (A:25-251) Essential for mitotic growth 1, EMG1 {Saccharomyces cerevisiae [TaxId: 4932]}
Probab=99.31  E-value=3.2e-13  Score=106.03  Aligned_cols=85  Identities=13%  Similarity=0.170  Sum_probs=67.5

Q ss_pred             CCCCCCCEEEECHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEC-HHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCC
Q ss_conf             30688861775058899999875311477830899879987604-89999973028759994150114489997404531
Q gi|254780714|r   55 PAGGGAGMVLRVDILGKAIDHAVSQYTHEDIPRILMSPRGKTLT-QKRVRQLSQKLGVIIVCGRFEGIDERIIEARDLEE  133 (236)
Q Consensus        55 PyGGG~GMVlk~epi~~ai~~~~~~~~~~~~~vI~lSP~Gk~l~-Q~~a~~ls~~~~liliCGrYEGiDeRvid~~~d~e  133 (236)
                      +..+|+-++|+.-..  .+..    ....++++|+|||+|++++ |+.++++++.++++|+||+|+|.|+|+.+.|++++
T Consensus       127 ~~~~~~~~Ll~vikn--~Itd----~lp~~~k~I~LS~~G~~~~~~~l~~~l~~~~~v~~viG~f~~GD~~~~~~yide~  200 (227)
T d2v3ka1         127 RSVNSEEKLLKVIKN--PITD----HLPTKCRKVTLSFDAPVIRVQDYIEKLDDDESICVFVGAMARGKDNFADEYVDEK  200 (227)
T ss_dssp             ECTTTCSEEEEEECS--CGGG----TSCSSEEEEEECTTSCBCCHHHHHHTSCTTCEEEEEEECSSSSCSCTTTTTCSEE
T ss_pred             CCCCCCCCEEEEECC--CCCC----CCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCEE
T ss_conf             348986421234426--4202----3578985999999887568999999735389979999503688845000005269


Q ss_pred             EEEHHEEECCCC
Q ss_conf             003340111732
Q gi|254780714|r  134 ISVGDYILSGGE  145 (236)
Q Consensus       134 iSiGDyVLsGGE  145 (236)
                      ||||||+||.--
T Consensus       201 ISIsdypLSa~~  212 (227)
T d2v3ka1         201 VGLSNYPLSASV  212 (227)
T ss_dssp             EBSCSSCCCHHH
T ss_pred             EEEECCCHHHHH
T ss_conf             997172651999


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: alpha/beta knot
superfamily: alpha/beta knot
family: EMG1/NEP1-like
domain: Essential for mitotic growth 1, EMG1
species: Saccharomyces cerevisiae [TaxId: 4932]