RPSBLAST alignment of GI: 254780714 and protein with PDBid: 3ief
>3ief_A TRNA (guanine-N(1)-)-methyltransferase; niaid, ssgcid, seattle structural genomics center for infectious diseases; 2.50A {Bartonella henselae} Length = 233
Score = 348 bits (896), Expect = 5e-97
Identities = 141/229 (61%), Positives = 178/229 (77%), Gaps = 5/229 (2%)
Query: 1 MTFHASILTLYPEMFPGHLEKSVAGKALACNLWSMDAIQIRNFSTDRHHSVDDTPAGGGA 60
M F A +LTLYPEMFPG L S+AG+AL +WS++ +QIR+F+ D+HHSVDDTPAGGGA
Sbjct: 2 MKFQARVLTLYPEMFPGFLGCSLAGQALKQGIWSLETVQIRDFALDKHHSVDDTPAGGGA 61
Query: 61 GMVLRVDILGKAIDHAVSQYTHEDIPRILMSPRGKTLTQKRVRQLSQKLGVIIVCGRFEG 120
GMV+R D+L A+D D PR+LMSPRG+ L Q R L++ GV +VCGRFEG
Sbjct: 62 GMVMRADVLAAALDSC-----PNDSPRLLMSPRGRLLNQAYARSLARSSGVTLVCGRFEG 116
Query: 121 IDERIIEARDLEEISVGDYILSGGEPAALILLDAVVRLLPGVLGNQQSTIHESFENGLLE 180
+DERIIEAR+LEE+S+GDYILSGGE AAL+LLDA+VRLLPGV+GN+ S ESFENGLLE
Sbjct: 117 VDERIIEARELEEVSIGDYILSGGETAALVLLDAIVRLLPGVMGNEISAKCESFENGLLE 176
Query: 181 FPQYTRPQIWEGLAIPPILNSGDHERIKKWRKEQSFALTKKHRPDLLSK 229
PQYTRP ++EG IPP+L SG H+ I WR++Q+ +LT++ RPDL +
Sbjct: 177 HPQYTRPAVFEGRGIPPVLTSGHHKAIANWRQQQAESLTRQRRPDLYAL 225