HHsearch alignment for GI: 254780715 and conserved domain: COG0335
>COG0335 RplS Ribosomal protein L19 [Translation, ribosomal structure and biogenesis].
Probab=100.00 E-value=1e-43 Score=296.44 Aligned_cols=112 Identities=63% Similarity=1.083 Sum_probs=108.9
Q ss_pred CC--HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCCEEEE
Q ss_conf 93--5899979999997602798973789989999998358877401234535431366664338863003561302899
Q gi|254780715|r 1 MN--IIDELDHEEMVRIESKRSLPKFSPGDTLCVKTIITEGDKSRIQAYEGVCIARSGRGINKNFTVRKISYGEGMNRLF 78 (141)
Q Consensus 1 Mn--li~~le~~~~~~~~~k~~~P~f~~GD~v~V~~~i~eg~k~R~Q~F~GvvI~~~~~G~~stftvRki~~g~GVE~~f 78 (141)
T Consensus 1 m~~~~i~~le~~q~-----~~~iP~f~~GDtvrv~vki~Eg~keR~Q~FeGvVia~r~~G~~~tftvRkis~G~GVEr~F 75 (115)
T COG0335 1 MNIPIIQQLEQEQI-----KKDIPSFRPGDTVRVHVKIVEGSKERVQAFEGVVIARRGRGISETFTVRKISYGVGVERVF 75 (115)
T ss_pred CCCHHHHHHHHHHH-----HHCCCCCCCCCEEEEEEEEEECCCEEEEEEEEEEEEECCCCCCCEEEEEEEECCCEEEEEE
T ss_conf 97279999999988-----8508989999889999999868807876255899998799865118999840584088997
Q ss_pred ECCCCCEEEEEEEECCHHHHHHHHHHCCCCCCEEEHHHH
Q ss_conf 910786101222000204678768750888410220120
Q gi|254780715|r 79 PLYSPMIQDITVIRRGKVRRSKLYYLQDLRGKAARIKEN 117 (141)
Q Consensus 79 pl~SP~i~~Iev~r~gkvRrakLyYLR~~~gk~arik~~ 117 (141)
T Consensus 76 p~~SP~Ie~IeV~rrGkVRRAKLYYLR~~~GKaArIke~ 114 (115)
T COG0335 76 PLHSPLIESIEVVRRGKVRRAKLYYLRERRGKAARIKEK 114 (115)
T ss_pred ECCCCCEEEEEEEECCCEEEEEEEEEECCCCCCEEEEEC
T ss_conf 258984507999961826144467641355521056533