HHsearch alignment of GI: 254780715 and MMDB domain: 2j01_T_19-98
>2j01_T (T:19-98) 50S ribosomal protein L19; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus}
Probab=99.96 E-value=2.1e-31 Score=218.44 Aligned_cols=80 Identities=51% Similarity=0.968 Sum_probs=79.0
Q ss_pred CCCCCCCCEEEEEEEEECCCCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCCEEEEECCCCCEEEEEEEECCHHHHHH
Q ss_conf 89737899899999983588774012345354313666643388630035613028999107861012220002046787
Q gi|254780715|r 21 LPKFSPGDTLCVKTIITEGDKSRIQAYEGVCIARSGRGINKNFTVRKISYGEGMNRLFPLYSPMIQDITVIRRGKVRRSK 100 (141)
Q Consensus 21 ~P~f~~GD~v~V~~~i~eg~k~R~Q~F~GvvI~~~~~G~~stftvRki~~g~GVE~~fpl~SP~i~~Iev~r~gkvRrak 100 (141)
+|+|++||||+|++++.||+|+|+|.|+|+||+++++|+++||||||+++|+|||++||||||+|++|||+++|||||||
T Consensus 1 iP~f~~GD~v~V~~~i~eg~k~R~q~f~GvvI~~~~~G~~~tftlR~i~~g~GVEr~f~l~SP~i~~IeVir~~kvRRAK 80 (80)
T 2j01_T 1 LPEFRPGDTVRVSYKVKEGNRTRIQDFEGIVIRIRRNGFNTTFTVRKVSYGVGVERIFPLHSPLIQKIDIVQRGRARRAK 80 (80)
T ss_dssp SCCCCSSCBBCCCCCCBTTBSCCCCCCBCEEEEEECCSSSCEEEEEEEETTEEEEEEECSSSSCSCCCBCCCCBCCSSSS
T ss_pred CCCCCCCCEEEEEEEECCCCCCEEEEEEEEEEEEECCCCCEEEEEEEEECCCCEEEEEEECCCCCCEEEEEECCCEEHHH
T ss_conf 99828988999999975788413677556898983698630798888607864899999669987757887227301100