HHsearch alignment of GI: 254780715 and MMDB domain: 3i1n_P_
>3i1n_P (P:) 50S ribosomal protein L19; ribosome structure, protein-RNA complex, acetylation, ribonucleoprotein, ribosomal protein, RNA-binding, rRNA- binding, methylation; 3.19A {Escherichia coli k-12} PDB: 1vs8_P 3e1b_I 3e1d_I 1vs6_P 3i1p_P 3i1r_P 3i1t_P 3i20_P 3i22_P 2qam_P* 1p85_N 1p86_N 2awb_P 2gya_N 2gyc_N 2aw4_P 2i2v_P 2j28_P 2i2t_P* 2qao_P* ...
Probab=100.00 E-value=2e-43 Score=294.25 Aligned_cols=113 Identities=55% Similarity=0.905 Sum_probs=109.6
Q ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCCEEEEEC
Q ss_conf 93589997999999760279897378998999999835887740123453543136666433886300356130289991
Q gi|254780715|r 1 MNIIDELDHEEMVRIESKRSLPKFSPGDTLCVKTIITEGDKSRIQAYEGVCIARSGRGINKNFTVRKISYGEGMNRLFPL 80 (141)
Q Consensus 1 Mnli~~le~~~~~~~~~k~~~P~f~~GD~v~V~~~i~eg~k~R~Q~F~GvvI~~~~~G~~stftvRki~~g~GVE~~fpl 80 (141)
+|+|+.+|++++ +.++|+|+|||||+|++++.||+|+|+|.|+|+||+++++|+++||||||+++|+|||++||+
T Consensus 2 ~~Li~~ie~~~~-----k~~~p~f~~GD~v~V~~~i~e~~k~r~q~f~GvvI~~~~~g~~~tftlR~i~~gvGVE~~fpl 76 (115)
T 3i1n_P 2 SNIIKQLEQEQM-----KQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQT 76 (115)
T ss_dssp CCTTTHHHHTTC-----CSCCCCCCTTCCCEEEEEEECSSCEEEEEEECEEEEECCCGGGCCEEEECCBTTBCEEEEECT
T ss_pred HHHHHHHHHHHH-----HCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEEEEEEECCCCCEEEEEEEECCCCCEEEEEEC
T ss_conf 589999999984-----056998499989999999846885158899999999968984037988996377567999981
Q ss_pred CCCCEEEEEEEECCHHHHHHHHHHCCCCCCEEEHHHHC
Q ss_conf 07861012220002046787687508884102201200
Q gi|254780715|r 81 YSPMIQDITVIRRGKVRRSKLYYLQDLRGKAARIKENT 118 (141)
Q Consensus 81 ~SP~i~~Iev~r~gkvRrakLyYLR~~~gk~arik~~~ 118 (141)
|||+|++|+|+++|||||||||||||+.||+|||||+.
T Consensus 77 ~SP~I~~IeV~~~~kvRRaKLyYLR~~~gk~arike~~ 114 (115)
T 3i1n_P 77 HSPVVDSISVKRRGAVRKAKLYYLRERTGKAARIKERL 114 (115)
T ss_dssp TCTTTCEEECCSCBCCSCSCCGGGGGTCSGGGCCCBCC
T ss_pred CCCCCCCEEEECCCCEEEEEEEEECCCCCHHHHHHHHC
T ss_conf 79982202443158152100555204722677644521