HHsearch results for GI: 254780715 and protein with PDBid: 3ofq_P
>3ofq_P 50S ribosomal protein L19; protein biosynthesis, ribosomes, RNA, tRNA, transfer, antibi EXIT, peptidyl, ribosomal subunit, large; 3.10A {Escherichia coli} PDB: 1p85_N 1p86_N 2awb_P 2gya_N 2gyc_N 2aw4_P 2i2v_P 2j28_P 2i2t_P* 2qao_P* 2qba_P* 2qbc_P* 2qbe_P 2qbg_P 2qbi_P* 2qbk_P* 2qov_P 2qox_P 2qoz_P* 2qp1_P* ...
Probab=100.00 E-value=5.6e-45 Score=303.02 Aligned_cols=112 Identities=55% Similarity=0.917 Sum_probs=109.2
Q ss_pred CHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCCEEEEECC
Q ss_conf 35899979999997602798973789989999998358877401234535431366664338863003561302899910
Q gi|254780715|r 2 NIIDELDHEEMVRIESKRSLPKFSPGDTLCVKTIITEGDKSRIQAYEGVCIARSGRGINKNFTVRKISYGEGMNRLFPLY 81 (141)
Q Consensus 2 nli~~le~~~~~~~~~k~~~P~f~~GD~v~V~~~i~eg~k~R~Q~F~GvvI~~~~~G~~stftvRki~~g~GVE~~fpl~ 81 (141)
|+|+++|++++ ++++|+|+|||||+|++++.||+|+|+|.|+|+||+++++|+++||||||+++|+|||++||||
T Consensus 2 nli~~le~~~~-----k~~iP~f~~GDtV~V~~~i~eg~K~R~Q~feGvvIa~k~~G~~stftvRki~~g~GVEr~fpl~ 76 (114)
T 3ofq_P 2 NIIKQLEQEQM-----KQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQTH 76 (114)
T ss_dssp TTTTTTTGGGC-----CSCCCCCCTTCCCCCCEECCCSSCCCEECCCCCCCBCCCSGGGCEEBCCCCBTTBCEECCEETT
T ss_pred HHHHHHHHHHH-----HCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEEEEECCCCCCEEEEEEECCCCCEEEEEECC
T ss_conf 58999999985-----2549984999899999998368876432467999999899868439999972886599999877
Q ss_pred CCCEEEEEEEECCHHHHHHHHHHCCCCCCEEEHHHHC
Q ss_conf 7861012220002046787687508884102201200
Q gi|254780715|r 82 SPMIQDITVIRRGKVRRSKLYYLQDLRGKAARIKENT 118 (141)
Q Consensus 82 SP~i~~Iev~r~gkvRrakLyYLR~~~gk~arik~~~ 118 (141)
||+|++|||+++|||||||||||||+.||+|||+++.
T Consensus 77 SP~I~~Iev~~~~kvRRaKLyYLR~~~gK~arike~~ 113 (114)
T 3ofq_P 77 SPVVDSISVKRRGAVRKAKLYYLRERTGKAARIKERL 113 (114)
T ss_dssp CGGGCCCCCCSCCCCCSSCCGGGSSCCTTTSCCCCCC
T ss_pred CCCCCEEEEEECCCEEHHHEEEHHCCCCHHHHHHHHC
T ss_conf 9996437998626231121201005711676422412