HHsearch results for GI: 254780715 and protein with PDBid: 3ofq_P

>3ofq_P 50S ribosomal protein L19; protein biosynthesis, ribosomes, RNA, tRNA, transfer, antibi EXIT, peptidyl, ribosomal subunit, large; 3.10A {Escherichia coli} PDB: 1p85_N 1p86_N 2awb_P 2gya_N 2gyc_N 2aw4_P 2i2v_P 2j28_P 2i2t_P* 2qao_P* 2qba_P* 2qbc_P* 2qbe_P 2qbg_P 2qbi_P* 2qbk_P* 2qov_P 2qox_P 2qoz_P* 2qp1_P* ...
Probab=100.00  E-value=5.6e-45  Score=303.02  Aligned_cols=112  Identities=55%  Similarity=0.917  Sum_probs=109.2

Q ss_pred             CHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCCEEEEECC
Q ss_conf             35899979999997602798973789989999998358877401234535431366664338863003561302899910
Q gi|254780715|r    2 NIIDELDHEEMVRIESKRSLPKFSPGDTLCVKTIITEGDKSRIQAYEGVCIARSGRGINKNFTVRKISYGEGMNRLFPLY   81 (141)
Q Consensus         2 nli~~le~~~~~~~~~k~~~P~f~~GD~v~V~~~i~eg~k~R~Q~F~GvvI~~~~~G~~stftvRki~~g~GVE~~fpl~   81 (141)
                      |+|+++|++++     ++++|+|+|||||+|++++.||+|+|+|.|+|+||+++++|+++||||||+++|+|||++||||
T Consensus         2 nli~~le~~~~-----k~~iP~f~~GDtV~V~~~i~eg~K~R~Q~feGvvIa~k~~G~~stftvRki~~g~GVEr~fpl~   76 (114)
T 3ofq_P            2 NIIKQLEQEQM-----KQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQTH   76 (114)
T ss_dssp             TTTTTTTGGGC-----CSCCCCCCTTCCCCCCEECCCSSCCCEECCCCCCCBCCCSGGGCEEBCCCCBTTBCEECCEETT
T ss_pred             HHHHHHHHHHH-----HCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEEEEECCCCCCEEEEEEECCCCCEEEEEECC
T ss_conf             58999999985-----2549984999899999998368876432467999999899868439999972886599999877


Q ss_pred             CCCEEEEEEEECCHHHHHHHHHHCCCCCCEEEHHHHC
Q ss_conf             7861012220002046787687508884102201200
Q gi|254780715|r   82 SPMIQDITVIRRGKVRRSKLYYLQDLRGKAARIKENT  118 (141)
Q Consensus        82 SP~i~~Iev~r~gkvRrakLyYLR~~~gk~arik~~~  118 (141)
                      ||+|++|||+++|||||||||||||+.||+|||+++.
T Consensus        77 SP~I~~Iev~~~~kvRRaKLyYLR~~~gK~arike~~  113 (114)
T 3ofq_P           77 SPVVDSISVKRRGAVRKAKLYYLRERTGKAARIKERL  113 (114)
T ss_dssp             CGGGCCCCCCSCCCCCSSCCGGGSSCCTTTSCCCCCC
T ss_pred             CCCCCEEEEEECCCEEHHHEEEHHCCCCHHHHHHHHC
T ss_conf             9996437998626231121201005711676422412