RPSBLAST alignment of GI: 254780715 and protein with PDBid: 2j01
>2j01_T 50S ribosomal protein L19; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus} SCOP: b.34.5.6 PDB: 2hgq_S 2hgj_S 2hgu_S 2j03_T 2jl6_T 2jl8_T 2v47_T 2v49_T 2wdi_T 2wdj_T 2wdl_T 2wdn_T 2wh2_T 2wh4_T 3hux_T 3huz_T 3f1f_T 1vsp_N 1vsa_N 3d5d_T ... Length = 146
Score = 116 bits (291), Expect = 2e-27
Identities = 51/141 (36%), Positives = 85/141 (60%), Gaps = 5/141 (3%)
Query: 1 MNIIDELDHEEMVRIESKRSLPKFSPGDTLCVKTIITEGDKSRIQAYEGVCIARSGRGIN 60
+I ++ + + LP+F PGDT+ V + EG+++RIQ +EG+ I G N
Sbjct: 4 GALIKLVESRYV-----RTDLPEFRPGDTVRVSYKVKEGNRTRIQDFEGIVIRIRRNGFN 58
Query: 61 KNFTVRKISYGEGMNRLFPLYSPMIQDITVIRRGKVRRSKLYYLQDLRGKAARIKENTGK 120
FTVRK+SYG G+ R+FPL+SP+IQ I +++RG+ RR+KLY++++L + R K +
Sbjct: 59 TTFTVRKVSYGVGVERIFPLHSPLIQKIDIVQRGRARRAKLYFIRNLSDREIRRKLRADR 118
Query: 121 RAKALNEEVRRAALPEKEMSK 141
+ + RAA E + ++
Sbjct: 119 KRIDQDRAAERAAKEEAQKAQ 139