HHsearch alignment for GI: 254780716 and conserved domain: CHL00194

>CHL00194 ycf39 Ycf39; Provisional.
Probab=95.76  E-value=0.082  Score=32.92  Aligned_cols=109  Identities=15%  Similarity=0.154  Sum_probs=64.3

Q ss_pred             EEEEE-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHH
Q ss_conf             56981-57111688999997898599973998999999971221127840328989998605778899997699069999
Q gi|254780716|r    6 IGIIG-LGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQ   84 (475)
Q Consensus         6 IGiIG-LG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~   84 (475)
T Consensus         3 ILV~GATG~lGr~vVr~Ll~~G~~Vr~lvRnp~ka~~l~~~Gve~v--~gDl~dpesl~~Al~GvdaVi~~~~~~-----   75 (319)
T CHL00194          3 LLVIGATGTLGRQIVRRALDEGYQVKCLVRNLRKAAFLKEWGAELV--YGDLSLPETIPPALEGITAIIDASTSR-----   75 (319)
T ss_pred             EEEECCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCEEE--EECCCCHHHHHHHHCCCCEEEEECCCC-----
T ss_conf             9998998589999999999688908999578676323421596799--942788778999965996799945667-----


Q ss_pred             HHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCC-EECCCCCCC
Q ss_conf             999997207899899967986578999999999847994-306754676
Q gi|254780716|r   85 LIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIY-FIGIGVSGG  132 (475)
Q Consensus        85 vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~-fid~pVSGG  132 (475)
T Consensus        76 ----------~~~~-~~~~~vd~~g~~~li~AAk~aGVkr~V~lS~lga  113 (319)
T CHL00194         76 ----------PSDL-NNAYQIDLEGKLALIEAAKAAKVKRFIFFSILNA  113 (319)
T ss_pred             ----------CCCC-CHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf             ----------7886-2088988988999999999849988999613566