HHsearch alignment for GI: 254780716 and conserved domain: PRK00421

>PRK00421 murC UDP-N-acetylmuramate--L-alanine ligase; Provisional.
Probab=97.11  E-value=0.033  Score=35.83  Aligned_cols=111  Identities=14%  Similarity=0.230  Sum_probs=69.4

Q ss_pred             EEEEEECCHHHH-HHHHHHHHCCCEEEEEECCHHH-HHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEE--CCCH-
Q ss_conf             056981571116-8899999789859997399899-9999971221127840328989998605778899997--6990-
Q gi|254780716|r    5 DIGIIGLGSMGS-NLSLNILDKGFRLAVYNKDFEL-TDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMM--VTDG-   79 (475)
Q Consensus         5 ~IGiIGLG~MG~-~mA~nL~~~G~~V~vydr~~~~-~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~--vp~g-   79 (475)
T Consensus        10 ~ih~iGigG~GmsalA~~l~~~G~~V~gsD~~~~~~~~~L~~~Gi~v~~---g-~~~~----~l~~~d~vV~Sp~I~~~~   81 (459)
T PRK00421         10 RIHFVGIGGIGMSGLAEVLLNLGYKVSGSDLKESAVTQRLLELGAIIFI---G-HDAE----NIKGADVVVVSSAIKPDN   81 (459)
T ss_pred             EEEEEEECHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCEEEC---C-CCHH----HCCCCCEEEECCCCCCCC
T ss_conf             8999986688899999999968993999889899789999978799977---9-8979----879999999899859989


Q ss_pred             HHHHHHHH---------HHH-HCCCCCC-EEEECCCCCHHHHHHHHHHHHHCCCC
Q ss_conf             69999999---------997-2078998-99967986578999999999847994
Q gi|254780716|r   80 DPVDQLID---------KLK-PLLSPED-ILLDGGNSHFCDTQIRSLQLSEKGIY  123 (475)
Q Consensus        80 ~~v~~vi~---------~l~-~~l~~g~-iiID~sts~~~~t~~~~~~l~~kgi~  123 (475)
T Consensus        82 p~~~~a~~~gi~v~~~~e~l~~~~~~~~~IaVtGTnGKTTtT~ll~~il~~~g~~  136 (459)
T PRK00421         82 PELVAARELGIPVVRRAEMLAELMRLRTSIAVAGTHGKTTTTSLLAHVLAEAGLD  136 (459)
T ss_pred             HHHHHHHHCCCCEEEHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCC
T ss_conf             9999999879979889999999982596499977888611899999999976998