HHsearch alignment for GI: 254780716 and conserved domain: PRK00421
>PRK00421 murC UDP-N-acetylmuramate--L-alanine ligase; Provisional.
Probab=97.11 E-value=0.033 Score=35.83 Aligned_cols=111 Identities=14% Similarity=0.230 Sum_probs=69.4
Q ss_pred EEEEEECCHHHH-HHHHHHHHCCCEEEEEECCHHH-HHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEE--CCCH-
Q ss_conf 056981571116-8899999789859997399899-9999971221127840328989998605778899997--6990-
Q gi|254780716|r 5 DIGIIGLGSMGS-NLSLNILDKGFRLAVYNKDFEL-TDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMM--VTDG- 79 (475)
Q Consensus 5 ~IGiIGLG~MG~-~mA~nL~~~G~~V~vydr~~~~-~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~--vp~g- 79 (475)
T Consensus 10 ~ih~iGigG~GmsalA~~l~~~G~~V~gsD~~~~~~~~~L~~~Gi~v~~---g-~~~~----~l~~~d~vV~Sp~I~~~~ 81 (459)
T PRK00421 10 RIHFVGIGGIGMSGLAEVLLNLGYKVSGSDLKESAVTQRLLELGAIIFI---G-HDAE----NIKGADVVVVSSAIKPDN 81 (459)
T ss_pred EEEEEEECHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCEEEC---C-CCHH----HCCCCCEEEECCCCCCCC
T ss_conf 8999986688899999999968993999889899789999978799977---9-8979----879999999899859989
Q ss_pred HHHHHHHH---------HHH-HCCCCCC-EEEECCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 69999999---------997-2078998-99967986578999999999847994
Q gi|254780716|r 80 DPVDQLID---------KLK-PLLSPED-ILLDGGNSHFCDTQIRSLQLSEKGIY 123 (475)
Q Consensus 80 ~~v~~vi~---------~l~-~~l~~g~-iiID~sts~~~~t~~~~~~l~~kgi~ 123 (475)
T Consensus 82 p~~~~a~~~gi~v~~~~e~l~~~~~~~~~IaVtGTnGKTTtT~ll~~il~~~g~~ 136 (459)
T PRK00421 82 PELVAARELGIPVVRRAEMLAELMRLRTSIAVAGTHGKTTTTSLLAHVLAEAGLD 136 (459)
T ss_pred HHHHHHHHCCCCEEEHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCC
T ss_conf 9999999879979889999999982596499977888611899999999976998