HHsearch alignment for GI: 254780716 and conserved domain: PRK01710
>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=97.17 E-value=0.01 Score=39.66 Aligned_cols=115 Identities=14% Similarity=0.204 Sum_probs=66.3
Q ss_pred CCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHH-H----HHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEE--
Q ss_conf 88056981571116889999978985999739989-9----9999971221127840328989998605778899997--
Q gi|254780716|r 3 QADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFE-L----TDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMM-- 75 (475)
Q Consensus 3 k~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~-~----~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~-- 75 (475)
T Consensus 14 ~kkv~i~GlG~sG~a~a~~L~~~g~~v~~~D~~~~~~~~~~~~~l~~~gi----~~~~g~~~---~~~~~~~d~vv~SPg 86 (458)
T PRK01710 14 NKKVAVVGIGVSNIPLIKFLVKLGAKVTAFDKKSEEELGEISLELKEKGV----NLELGENY---LDKLTGFDVIFKTPS 86 (458)
T ss_pred CCEEEEEEECHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCC----EEEECCCH---HHHCCCCCEEEECCC
T ss_conf 99699997878899999999978897999989884314899999985799----89957840---542378888998998
Q ss_pred CC-CHHHHHHHHH---------HHHHCCCCCCEE-EECCCCCHHHHHHHHHHHHHCCCCE
Q ss_conf 69-9069999999---------997207899899-9679865789999999998479943
Q gi|254780716|r 76 VT-DGDPVDQLID---------KLKPLLSPEDIL-LDGGNSHFCDTQIRSLQLSEKGIYF 124 (475)
Q Consensus 76 vp-~g~~v~~vi~---------~l~~~l~~g~ii-ID~sts~~~~t~~~~~~l~~kgi~f 124 (475)
T Consensus 87 I~~~~p~~~~a~~~gi~v~~e~el~~~~~~~~~IaVTGTnGKTTTtsmi~~iL~~~g~~~ 146 (458)
T PRK01710 87 MRIDSPELVKAKEEGAYITSEMEEFIKYCPAKVFGITGSDGKTTTTTLIYEMLKEEGYKT 146 (458)
T ss_pred CCCCCHHHHHHHHCCCCEECHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCE
T ss_conf 799899999999879937409999986375877999368984789999999999849975