HHsearch alignment for GI: 254780716 and conserved domain: PRK02472
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=97.05 E-value=0.023 Score=36.97 Aligned_cols=115 Identities=15% Similarity=0.165 Sum_probs=66.5
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCH----HHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEE--CC
Q ss_conf 805698157111688999997898599973998----999999971221127840328989998605778899997--69
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDF----ELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMM--VT 77 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~----~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~--vp 77 (475)
T Consensus 10 k~i~viGlG~sG~s~a~~L~~~G~~V~~~D~~~~~~~~~~~~l~~~gi~----~~~g~~~~~~~~--~~~d~vV~SPgI~ 83 (450)
T PRK02472 10 KKVLVLGLAKSGYAAAKLLHKLGANVTVNDGKPFSENPAAQELLEEGIK----VICGSHPLELLD--ENFDLMVKNPGIP 83 (450)
T ss_pred CEEEEEEECHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHCCCE----EEECCCHHHHCC--CCCCEEEECCCCC
T ss_conf 9899997789999999999988698999848866579899999967998----997888078605--7887999899879
Q ss_pred CHHH-HHHHHH---------HHHHCCCCCCEEEECCCCC-HHHHHHHHHHHHHCCCCE
Q ss_conf 9069-999999---------9972078998999679865-789999999998479943
Q gi|254780716|r 78 DGDP-VDQLID---------KLKPLLSPEDILLDGGNSH-FCDTQIRSLQLSEKGIYF 124 (475)
Q Consensus 78 ~g~~-v~~vi~---------~l~~~l~~g~iiID~sts~-~~~t~~~~~~l~~kgi~f 124 (475)
T Consensus 84 ~~~p~~~~a~~~~i~v~~~~el~~~~~~~~~IaVTGTnGKTTTt~ll~~iL~~~g~~~ 141 (450)
T PRK02472 84 YDNPMVEEALEKGIPIITEVELAYLISEAPIIGITGSNGKTTTTTLIAEMLNAGGQHG 141 (450)
T ss_pred CCCHHHHHHHHCCCCEEEHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCE
T ss_conf 9999999999869967438788887515978998279997319999999999749973