HHsearch alignment for GI: 254780716 and conserved domain: PRK03803

>PRK03803 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=96.48  E-value=0.093  Score=32.50  Aligned_cols=122  Identities=15%  Similarity=0.164  Sum_probs=67.4

Q ss_pred             EEEEECCHHHHHHHHHHHHCCCEEEEEECCH--HHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEE--CCCHH-
Q ss_conf             5698157111688999997898599973998--999999971221127840328989998605778899997--69906-
Q gi|254780716|r    6 IGIIGLGSMGSNLSLNILDKGFRLAVYNKDF--ELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMM--VTDGD-   80 (475)
Q Consensus         6 IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~--~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~--vp~g~-   80 (475)
T Consensus        10 ~LV~G~G~sG~s~a~~L~~~G~~V~~~D~~~~~~~~~~~~~~~~~i--~~~~g~~~~~~---~~~~d~vv~SPgI~~~~p   84 (448)
T PRK03803         10 RIVVGLGKSGMSLVRFLARQGYQFAVTDTRENPPELATLRRDYPQV--EVRCGELDAEF---LCQAEEIIVSPGLALATP   84 (448)
T ss_pred             EEEEEECHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCC--EEEECCCCHHH---HCCCCEEEECCCCCCCCH
T ss_conf             8999989999999999997889599991899916799999747997--79978889778---078999998997299999


Q ss_pred             HHHHHHH---------HHHHCCCCCCEEEECCCCCHH-HHHHHHHHHHHCCCCEECCCCCCC
Q ss_conf             9999999---------997207899899967986578-999999999847994306754676
Q gi|254780716|r   81 PVDQLID---------KLKPLLSPEDILLDGGNSHFC-DTQIRSLQLSEKGIYFIGIGVSGG  132 (475)
Q Consensus        81 ~v~~vi~---------~l~~~l~~g~iiID~sts~~~-~t~~~~~~l~~kgi~fid~pVSGG  132 (475)
T Consensus        85 ~~~~a~~~~i~i~~e~el~~~~~~~~~IaVTGTnGKTTTtsli~~iL~~~g~~~~~gGNiG~  146 (448)
T PRK03803         85 ALQAAAAAGIKISGDIELFARAAKAPIVAITGSNAKSTVTTLVGEMAKAAGKRVAVGGNLGT  146 (448)
T ss_pred             HHHHHHHCCCCEECHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECCC
T ss_conf             99999985996831999986217898899858998388999999999865983799403276