HHsearch alignment for GI: 254780716 and conserved domain: PRK05086

Probab=93.03  E-value=0.58  Score=26.67  Aligned_cols=102  Identities=18%  Similarity=0.230  Sum_probs=53.7

Q ss_pred             EEEEEEC-CHHHHHHHHHHHHC---CCEEEEEECCHHH---HHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEEC-
Q ss_conf             0569815-71116889999978---9859997399899---99999712211278403289899986057788999976-
Q gi|254780716|r    5 DIGIIGL-GSMGSNLSLNILDK---GFRLAVYNKDFEL---TDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMV-   76 (475)
Q Consensus         5 ~IGiIGL-G~MG~~mA~nL~~~---G~~V~vydr~~~~---~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~v-   76 (475)
T Consensus         2 KV~IiGA~G~VG~s~A~~l~~~~~~~~el~L~Di~~~~~G~alDL~h-~~-~~~~~~~~~-~~~~~~~l~~adiVvitAG   78 (312)
T PRK05086          2 KVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSH-IP-TAVKIKGFS-GEDPTPALEGADVVLISAG   78 (312)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHC-CC-CCCCCCEEE-CCCHHHHHCCCCEEEECCC
T ss_conf             89999899869999999998289877749997588886105656547-87-546653461-6986787179999998789


Q ss_pred             --------------CCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHH
Q ss_conf             --------------990699999999972078998999679865789999
Q gi|254780716|r   77 --------------TDGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQI  112 (475)
Q Consensus        77 --------------p~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~  112 (475)
T Consensus        79 ~~rkpG~tR~dLl~~Na~I~~~i~~~I~~~~-p~aiiivvs--NPvD~mt  125 (312)
T PRK05086         79 VARKPGMDRSDLFNVNAGIVKNLVEKVAKTC-PKACIGIIT--NPVNTTV  125 (312)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC-CCCEEEEEC--CCHHHHH
T ss_conf             8998589889999987899999999887208-971899954--8327789