HHsearch alignment for GI: 254780716 and conserved domain: PRK05557

Probab=93.75  E-value=0.62  Score=26.45  Aligned_cols=82  Identities=16%  Similarity=0.289  Sum_probs=53.4

Q ss_pred             EEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHH
Q ss_conf             5698--1571116889999978985999739989999999-712211278403289899986057788999976990699
Q gi|254780716|r    6 IGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFI-KKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPV   82 (475)
Q Consensus         6 IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~-~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v   82 (475)
T Consensus         7 ~~lITGgs~GIG~aia~~la~~G~~Vii~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~Dlt~~~~v   70 (248)
T PRK05557          7 VALVTGASRGIGRAIAERLAAQGANVVLNYASSEAGAEALVAEIGALGGKA----------------LAVQGDVADAESI   70 (248)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCE----------------EEEEECCCCHHHH
T ss_conf             899948976899999999998799899996985658999999999639958----------------9999038999999


Q ss_pred             HHHHHHHHHCCCCCCEEEECC
Q ss_conf             999999972078998999679
Q gi|254780716|r   83 DQLIDKLKPLLSPEDILLDGG  103 (475)
Q Consensus        83 ~~vi~~l~~~l~~g~iiID~s  103 (475)
T Consensus        71 ~~~~~~~~~~~g~iD~linnA   91 (248)
T PRK05557         71 ERAVDEAKAEFGGVDILVNNA   91 (248)
T ss_pred             HHHHHHHHHHCCCCCEEEECC
T ss_conf             999999999829971999899