HHsearch alignment for GI: 254780716 and conserved domain: PRK06223

Probab=96.57  E-value=0.048  Score=34.59  Aligned_cols=101  Identities=16%  Similarity=0.273  Sum_probs=60.2

Q ss_pred             EEEEEECCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHCC---CC---CCCCEECCCHHHHHHHCCCCCEEEEEC
Q ss_conf             05698157111688999997898--59997399899999997122---11---278403289899986057788999976
Q gi|254780716|r    5 DIGIIGLGSMGSNLSLNILDKGF--RLAVYNKDFELTDVFIKKIS---GL---SQKVIVTKNLEQMVEAVCKPRKILMMV   76 (475)
Q Consensus         5 ~IGiIGLG~MG~~mA~nL~~~G~--~V~vydr~~~~~~~l~~~~~---~~---~~~~~~~~s~~e~v~~l~~pr~Iil~v   76 (475)
T Consensus         2 KI~IiGaG~VG~~~a~~l~~~~l~~el~L~Di~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~d~~~----~~daDiVVita   77 (312)
T PRK06223          2 KISIIGAGNVGATLAHLLALKELGKDVVLFDIPEGIPQGKALDIAESSAVDGFDAKITGTNDYAD----IAGSDVVIITA   77 (312)
T ss_pred             EEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCHHH----HCCCCEEEEEC
T ss_conf             79999969899999999985799874899769997336798887651433688847983788899----57999999906


Q ss_pred             --C--CH-----------HHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHH
Q ss_conf             --9--90-----------699999999972078998999679865789999
Q gi|254780716|r   77 --T--DG-----------DPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQI  112 (475)
Q Consensus        77 --p--~g-----------~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~  112 (475)
T Consensus        78 g~~rk~g~tR~dll~~N~~I~k~i~~~i~~~~-p~~iilvvs--NPvDv~t  125 (312)
T PRK06223         78 GVPRKPGMSRDDLLGINAKIMKDVGEGIKKYA-PDAIVIVIT--NPVDAMT  125 (312)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCCEEEEEC--CCHHHHH
T ss_conf             77899998868999987899999999998409-981899936--9368999