HHsearch alignment for GI: 254780716 and conserved domain: PRK08085

Probab=96.28  E-value=0.055  Score=34.20  Aligned_cols=83  Identities=16%  Similarity=0.250  Sum_probs=60.6

Q ss_pred             EEEE--ECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf             5698--15711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r    6 IGII--GLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD   83 (475)
Q Consensus         6 IGiI--GLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~   83 (475)
T Consensus        11 ~alVTG~~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~----------------~~~~~Dvtd~~~v~   74 (254)
T PRK08085         11 NILITGSAQGIGFLLATGLAEYGAEIIINDITAERAEKAVAKLRQEGIKA----------------HAAAFNVTHKQEIE   74 (254)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEE----------------EEEECCCCCHHHHH
T ss_conf             89996856789999999999869999999698899999999998449818----------------99982689999999


Q ss_pred             HHHHHHHHCCCCCCEEEECCC
Q ss_conf             999999720789989996798
Q gi|254780716|r   84 QLIDKLKPLLSPEDILLDGGN  104 (475)
Q Consensus        84 ~vi~~l~~~l~~g~iiID~st  104 (475)
T Consensus        75 ~~v~~~~~~~G~iDilVnNAG   95 (254)
T PRK08085         75 AAIEHIEKDIGPIDVLINNAG   95 (254)
T ss_pred             HHHHHHHHHHCCCCEEEECCC
T ss_conf             999999998399869998986