HHsearch alignment for GI: 254780716 and conserved domain: PRK08762

Probab=96.16  E-value=0.04  Score=35.22  Aligned_cols=125  Identities=18%  Similarity=0.223  Sum_probs=73.1

Q ss_pred             CCEEEEEECCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHCCCCCC--CCEECCCHHHHHHHCCCCCEEEEECCCH
Q ss_conf             8805698157111688999997898-599973998999999971221127--8403289899986057788999976990
Q gi|254780716|r    3 QADIGIIGLGSMGSNLSLNILDKGF-RLAVYNKDFELTDVFIKKISGLSQ--KVIVTKNLEQMVEAVCKPRKILMMVTDG   79 (475)
Q Consensus         3 k~~IGiIGLG~MG~~mA~nL~~~G~-~V~vydr~~~~~~~l~~~~~~~~~--~~~~~~s~~e~v~~l~~pr~Iil~vp~g   79 (475)
T Consensus       138 ~a~VlivG~GGLGs~~a~yLA~aGVG~i~lvD~D~Ve~SNL~RQil~~~~diG~~Ka~~a~~~L~~~N-p~i~i~~~~~-  215 (379)
T PRK08762        138 RARVLLIGAGGLGSPAAFYLAAAGVGHLRIADHDVVDRSNLQRQILHTEDSVGQPKVDSAAQRIAALN-PRVQVEAVQT-  215 (379)
T ss_pred             HCCEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHCCCCCHHHCCCHHHHHHHHHHHHHC-CCCCEEEEHH-
T ss_conf             39789988875579999999983797589762886133450112574643355558999999999868-9973385021-


Q ss_pred             HHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCC
Q ss_conf             699999999972078998999679865789999999998479943067546760
Q gi|254780716|r   80 DPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGV  133 (475)
Q Consensus        80 ~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~  133 (475)
T Consensus       216 ~l~~~n~~~l---i~~~DlViDctDN-~~tR~liN~~c~~~~~PlV~ga~~g~~  265 (379)
T PRK08762        216 RVTSSNVEAL---LQDVDVVVDGADN-FPARYLLNDACVKLGKPLVYGAVQRFE  265 (379)
T ss_pred             CCCHHHHHHH---HHHCCEEEECCCC-HHHHHHHHHHHHHHCCCEEEEEEECCE
T ss_conf             0898999999---8628899986887-788999999999979997999884469