HHsearch alignment for GI: 254780716 and conserved domain: PRK08862

Probab=96.62  E-value=0.027  Score=36.42  Aligned_cols=81  Identities=17%  Similarity=0.269  Sum_probs=57.4

Q ss_pred             EEEE-E-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHH
Q ss_conf             5698-1-5711168899999789859997399899999997122112784032898999860577889999769906999
Q gi|254780716|r    6 IGII-G-LGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVD   83 (475)
Q Consensus         6 IGiI-G-LG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~   83 (475)
T Consensus         7 v~lITGas~GIG~aiA~~~A~~Ga~Vii~~r~~~~l~~~~~~i~~~g~~~----------------~~~~~d~~~~~~v~   70 (227)
T PRK08862          7 IILITSAGSVLGRTISCHFARLGATLILCDQDQSALNDTYEQCSALTDNV----------------YSYQLKDFSQESIR   70 (227)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCE----------------EEEEECCCCHHHHH
T ss_conf             99997988799999999999879999999699999999999999758974----------------89995166199999


Q ss_pred             HHHHHHHHCCCC-CCEEEEC
Q ss_conf             999999720789-9899967
Q gi|254780716|r   84 QLIDKLKPLLSP-EDILLDG  102 (475)
Q Consensus        84 ~vi~~l~~~l~~-g~iiID~  102 (475)
T Consensus        71 ~~~~~i~~~~g~~iDvLVNN   90 (227)
T PRK08862         71 HLFDAIEQQFNRAPDVLVNN   90 (227)
T ss_pred             HHHHHHHHHHCCCCEEEEEC
T ss_conf             99999999958997499856