HHsearch alignment for GI: 254780716 and conserved domain: PRK11730
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed.
Probab=98.59 E-value=3e-05 Score=58.29 Aligned_cols=192 Identities=14% Similarity=0.211 Sum_probs=119.0
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-----------CCC-------CCCCCEECCCHHHHHHH
Q ss_conf 805698157111688999997898599973998999999971-----------221-------12784032898999860
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKK-----------ISG-------LSQKVIVTKNLEQMVEA 65 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~-----------~~~-------~~~~~~~~~s~~e~v~~ 65 (475)
T Consensus 314 ~~v~ViGaG~MG~GIA~~~a~aG~~V~l~D~~~e~l~~g~~~~~~~~~~~v~~g~~~~~~~~~~l~ri~~~~~~~~---- 389 (715)
T PRK11730 314 KQAAVLGAGIMGGGIAYQSASKGVPVIMKDINQKALDLGMNEAAKLLNKQVERGRIDGLKMAGVLSTITPTLDYAG---- 389 (715)
T ss_pred CEEEEECCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHH----
T ss_conf 2799978771079999999957995799978999999999999999999986489987999999956874154024----
Q ss_pred CCCCCEEEEECCCHHHHHHHH-HHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHH----CCCCEECCCC-CCCCCCCCCC
Q ss_conf 577889999769906999999-999720789989996798657899999999984----7994306754-6760003568
Q gi|254780716|r 66 VCKPRKILMMVTDGDPVDQLI-DKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSE----KGIYFIGIGV-SGGVKGARSG 139 (475)
Q Consensus 66 l~~pr~Iil~vp~g~~v~~vi-~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~----kgi~fid~pV-SGG~~gA~~G 139 (475)
T Consensus 390 l~~~DlVIEAV~E~l~~K~~vf~~l~~~~~~~aIlAs-NTSsl~-i~~lA~~~~~Per~iG~HFfnP~~~m~LVE----- 462 (715)
T PRK11730 390 FKDVDVVVEAVVENPKVKAAVLAEVEQKVREDTILAS-NTSTIS-ISLLAKALKRPENFCGMHFFNPVHRMPLVE----- 462 (715)
T ss_pred HCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEE-CCCCCC-HHHHHHHCCCCCCEEEEEECCCCCCCCEEE-----
T ss_conf 3358889985436588999999999865587538851-576577-899997516821156522148844164488-----
Q ss_pred CEEEEE--CCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
Q ss_conf 437884--548999888999998750156786189856987467898877678788899989999999964289978999
Q gi|254780716|r 140 ASLMVG--GNEKAYNRVENILLSISAKYQNSPCCALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDSLNKNPLEIS 217 (475)
Q Consensus 140 ~slMvG--G~~~~~~~~~piL~~iaak~~~~~cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~~~~~~~~i~ 217 (475)
T Consensus 463 --Vv~g~~Ts~~t~~~~~~~~~~lgK~------pVvv~-d~pGF----i~NRil---~~~~~ea~~l~~eG--a~~~~ID 524 (715)
T PRK11730 463 --VIRGEKTSDETIATVVAYASKMGKT------PIVVN-DCPGF----FVNRVL---FPYFAGFSQLLRDG--ADFRQID 524 (715)
T ss_pred --EECCCCCCHHHHHHHHHHHHHCCCC------EEEEE-CCCCH----HHHHHH---HHHHHHHHHHHHCC--CCHHHHH
T ss_conf --8168999999999999999981982------38982-46860----587899---99999999999879--9999999
Q ss_pred HHHH-HCC
Q ss_conf 9998-606
Q gi|254780716|r 218 HLFS-KWD 224 (475)
Q Consensus 218 ~vf~-~w~ 224 (475)
T Consensus 525 ~a~~~~~G 532 (715)
T PRK11730 525 KVMEKQFG 532 (715)
T ss_pred HHHHHCCC
T ss_conf 99987479