HHsearch alignment for GI: 254780716 and conserved domain: PRK12557
>PRK12557 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein; Provisional.
Probab=97.54 E-value=0.011 Score=39.26 Aligned_cols=185 Identities=14% Similarity=0.185 Sum_probs=113.9
Q ss_pred HHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCC
Q ss_conf 1688999997898599973998999-999971221127840328989998605778899997699069999999997207
Q gi|254780716|r 15 GSNLSLNILDKGFRLAVYNKDFELT-DVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQLIDKLKPLL 93 (475)
Q Consensus 15 G~~mA~nL~~~G~~V~vydr~~~~~-~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~vi~~l~~~l 93 (475)
T Consensus 32 Gs~MAiefA~AGHDVvLaePn~~~lsee~w~~--VEdAgVkvv~dD~eAa---kh~Ei~ilFTPFGk~T~~Iak~Il~hl 106 (341)
T PRK12557 32 GSRMAIEFAEAGHDVVLAEPNKSMLSDEQWKR--VEDAGVKVVTDDAEAA---KHAEIAVLFTPFGKKTVEIAKEILPHL 106 (341)
T ss_pred CHHHHHHHHHCCCCEEEECCCCCCCCHHHHHH--HHHCCCEEECCCHHHH---HCCEEEEEECCCCCHHHHHHHHHHHHC
T ss_conf 04999999975784797357623169899999--9974966733616665---267589996476406789999886218
Q ss_pred CCCCEEEECCCCCHHHHHH-HHHHHHH----CCCC-EECCCCCCCCCC--------CCCCCEEEEECCHHHHHHHHHHHH
Q ss_conf 8998999679865789999-9999984----7994-306754676000--------356843788454899988899999
Q gi|254780716|r 94 SPEDILLDGGNSHFCDTQI-RSLQLSE----KGIY-FIGIGVSGGVKG--------ARSGASLMVGGNEKAYNRVENILL 159 (475)
Q Consensus 94 ~~g~iiID~sts~~~~t~~-~~~~l~~----kgi~-fid~pVSGG~~g--------A~~G~slMvGG~~~~~~~~~piL~ 159 (475)
T Consensus 107 pe~AVIcnTCTvspvvLy~~Le~eLr~kR~DvGisSmHPA~VPGTp~h~~Yviag~~~~g~~~---AteEQi~k~veL~e 183 (341)
T PRK12557 107 PEGAVICNTCTVSPVVLYYSLEVELRTKRKDVGISSMHPAAVPGTPQHGHYVIAGKATNGTEY---ATEEQIEKCVELAE 183 (341)
T ss_pred CCCCEEECCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC---CCHHHHHHHHHHHH
T ss_conf 778776166677599999999999830124247335687789998767528973677787401---46999999999999
Q ss_pred HHHCCCCCCCEEEEECCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
Q ss_conf 875015678618985698746789-887767878889998999999996428997899
Q gi|254780716|r 160 SISAKYQNSPCCALLGPDGSGHFV-KMIHNGIEYANMQLIADIYGILRDSLNKNPLEI 216 (475)
Q Consensus 160 ~iaak~~~~~cv~y~G~~GsGh~v-KMVhNgIey~~mq~iaE~~~~l~~~~~~~~~~i 216 (475)
T Consensus 184 S~gK~~-------yvvPadv~s~VaDMg-slvtav~l~gvldyy~vg~~ii~-AP~~M 232 (341)
T PRK12557 184 STGKEV-------YVVPADVSSTVADMG-SLLTAVTLSGVLDYYSVGTKIIK-APKEM 232 (341)
T ss_pred HCCCCC-------EEECHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHC-CHHHH
T ss_conf 629851-------660656524454568-89999999999999999899864-85999