HHsearch alignment for GI: 254780716 and conserved domain: PRK12557

>PRK12557 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein; Provisional.
Probab=97.54  E-value=0.011  Score=39.26  Aligned_cols=185  Identities=14%  Similarity=0.185  Sum_probs=113.9

Q ss_pred             HHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCC
Q ss_conf             1688999997898599973998999-999971221127840328989998605778899997699069999999997207
Q gi|254780716|r   15 GSNLSLNILDKGFRLAVYNKDFELT-DVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQLIDKLKPLL   93 (475)
Q Consensus        15 G~~mA~nL~~~G~~V~vydr~~~~~-~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~vi~~l~~~l   93 (475)
T Consensus        32 Gs~MAiefA~AGHDVvLaePn~~~lsee~w~~--VEdAgVkvv~dD~eAa---kh~Ei~ilFTPFGk~T~~Iak~Il~hl  106 (341)
T PRK12557         32 GSRMAIEFAEAGHDVVLAEPNKSMLSDEQWKR--VEDAGVKVVTDDAEAA---KHAEIAVLFTPFGKKTVEIAKEILPHL  106 (341)
T ss_pred             CHHHHHHHHHCCCCEEEECCCCCCCCHHHHHH--HHHCCCEEECCCHHHH---HCCEEEEEECCCCCHHHHHHHHHHHHC
T ss_conf             04999999975784797357623169899999--9974966733616665---267589996476406789999886218


Q ss_pred             CCCCEEEECCCCCHHHHHH-HHHHHHH----CCCC-EECCCCCCCCCC--------CCCCCEEEEECCHHHHHHHHHHHH
Q ss_conf             8998999679865789999-9999984----7994-306754676000--------356843788454899988899999
Q gi|254780716|r   94 SPEDILLDGGNSHFCDTQI-RSLQLSE----KGIY-FIGIGVSGGVKG--------ARSGASLMVGGNEKAYNRVENILL  159 (475)
Q Consensus        94 ~~g~iiID~sts~~~~t~~-~~~~l~~----kgi~-fid~pVSGG~~g--------A~~G~slMvGG~~~~~~~~~piL~  159 (475)
T Consensus       107 pe~AVIcnTCTvspvvLy~~Le~eLr~kR~DvGisSmHPA~VPGTp~h~~Yviag~~~~g~~~---AteEQi~k~veL~e  183 (341)
T PRK12557        107 PEGAVICNTCTVSPVVLYYSLEVELRTKRKDVGISSMHPAAVPGTPQHGHYVIAGKATNGTEY---ATEEQIEKCVELAE  183 (341)
T ss_pred             CCCCEEECCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC---CCHHHHHHHHHHHH
T ss_conf             778776166677599999999999830124247335687789998767528973677787401---46999999999999


Q ss_pred             HHHCCCCCCCEEEEECCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
Q ss_conf             875015678618985698746789-887767878889998999999996428997899
Q gi|254780716|r  160 SISAKYQNSPCCALLGPDGSGHFV-KMIHNGIEYANMQLIADIYGILRDSLNKNPLEI  216 (475)
Q Consensus       160 ~iaak~~~~~cv~y~G~~GsGh~v-KMVhNgIey~~mq~iaE~~~~l~~~~~~~~~~i  216 (475)
T Consensus       184 S~gK~~-------yvvPadv~s~VaDMg-slvtav~l~gvldyy~vg~~ii~-AP~~M  232 (341)
T PRK12557        184 STGKEV-------YVVPADVSSTVADMG-SLLTAVTLSGVLDYYSVGTKIIK-APKEM  232 (341)
T ss_pred             HCCCCC-------EEECHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHC-CHHHH
T ss_conf             629851-------660656524454568-89999999999999999899864-85999