HHsearch alignment for GI: 254780716 and conserved domain: TIGR01318
>TIGR01318 gltD_gamma_fam glutamate synthase, small subunit; InterPro: IPR006006 One pathway for the assimilation of ammonia and glutamate biosynthesis involves glutamate synthase (1.4.1.13 from EC) which transfers the amide group of glutamine to 2-oxoglutarate to yield two molecules of glutamate. 2 L-glutamate + NADP^+ = L-glutamine + 2-oxoglutarate + NADPH + H^+. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including Escherichia coli. ; GO: 0016639 oxidoreductase activity acting on the CH-NH2 group of donors NAD or NADP as acceptor, 0006537 glutamate biosynthetic process.
Probab=93.81 E-value=0.082 Score=32.92 Aligned_cols=34 Identities=21% Similarity=0.426 Sum_probs=32.1
Q ss_pred CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCHH
Q ss_conf 8056981571116889999978985999739989
Q gi|254780716|r 4 ADIGIIGLGSMGSNLSLNILDKGFRLAVYNKDFE 37 (475)
Q Consensus 4 ~~IGiIGLG~MG~~mA~nL~~~G~~V~vydr~~~ 37 (475)
T Consensus 144 ~rVAviGAGPAGLaCAD~L~RaGV~v~VfDRhP~ 177 (480)
T TIGR01318 144 KRVAVIGAGPAGLACADILARAGVQVVVFDRHPE 177 (480)
T ss_pred CEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCC
T ss_conf 2789977886025799987517855999747703