HHsearch alignment for GI: 254780716 and conserved domain: TIGR01692

>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase; InterPro: IPR011548 3-hydroxyisobutyrate dehydrogenase is an enzyme that catalyzes the NAD+-dependent oxidation of 3-hydroxyisobutyrate to methylmalonate semialdehyde of the valine catabolism pathway. In Pseudomonas aeruginosa, 3-hydroxyisobutyrate dehydrogenase (mmsB) is co-induced with methylmalonate-semialdehyde dehydrogenase (mmsA) when grown on medium containing valine as the sole carbon source. The positive transcriptional regulator of this operon (mmsR) is located upstream of these genes and has been identified as a member of the XylS/AraC family of transcriptional regulators . 3-hydroxyisobutyrate dehydrogenase shares high sequence homology to the characterised 3-hydroxyisobutyrate dehydrogenase from rat liver with conservation of proposed NAD+ binding residues at the N-terminus (G-8,10,13,24 and D-31). This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate . HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase. ; GO: 0008442 3-hydroxyisobutyrate dehydrogenase activity, 0051287 NAD binding.
Probab=100.00  E-value=0  Score=360.62  Aligned_cols=199  Identities=22%  Similarity=0.362  Sum_probs=189.3

Q ss_pred             EEECCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHH-
Q ss_conf             9815711168899999789859997399899999997122112784032898999860577889999769906999999-
Q gi|254780716|r    8 IIGLGSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQLI-   86 (475)
Q Consensus         8 iIGLG~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~vi-   86 (475)
T Consensus         1 FIGLGNMGgPMA~NL~KAGH~v~~FDL~p~av~~~v~aG~------~~A~S~~~a~~~Ad---~vITMLPAg~HV~sVY~   71 (290)
T TIGR01692         1 FIGLGNMGGPMAANLLKAGHAVRVFDLSPKAVEELVEAGA------QAAASAAEAAEGAD---VVITMLPAGKHVISVYS   71 (290)
T ss_pred             CCCCCCCCHHHHHHHHHHCCEEEEEECCHHHHHHHHHCCH------HCCCCHHHHHCCCC---EEEECCCCCHHHHHHHH
T ss_conf             9788888227999986118725775178899999996002------20545798845588---68634886034899983


Q ss_pred             --HHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCC-EEEEECCHHHHHHHHHHHHHHHC
Q ss_conf             --999720789989996798657899999999984799430675467600035684-37884548999888999998750
Q gi|254780716|r   87 --DKLKPLLSPEDILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGGVKGARSGA-SLMVGGNEKAYNRVENILLSISA  163 (475)
Q Consensus        87 --~~l~~~l~~g~iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG~~gA~~G~-slMvGG~~~~~~~~~piL~~iaa  163 (475)
T Consensus        72 gd~gIL~~~~K~~LlIDcSTIDpdsAr~~A~~Aa~~G~~f~DAPVSGG~GgA~AGTLtFmVGG~a~~F~~~~p~L~~Mg~  151 (290)
T TIGR01692        72 GDDGILAKVAKGSLLIDCSTIDPDSARKVAELAAAHGLVFVDAPVSGGVGGARAGTLTFMVGGEAEEFARARPVLEPMGR  151 (290)
T ss_pred             CCHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCC
T ss_conf             31334113678896332456786789999999998187210367775356520122305643765357889999853666


Q ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Q ss_conf             15678618985698746789887767878889998999999996428997899999986
Q gi|254780716|r  164 KYQNSPCCALLGPDGSGHFVKMIHNGIEYANMQLIADIYGILRDSLNKNPLEISHLFSK  222 (475)
Q Consensus       164 k~~~~~cv~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l~~~~~~~~~~i~~vf~~  222 (475)
T Consensus       152 ~------~~HcG~~GAGQ~AKICNNmlLGIsM~GtaEA~~Lg~k-lGLdp~~L~~i~~~  203 (290)
T TIGR01692       152 N------IVHCGDHGAGQAAKICNNMLLGISMIGTAEAMALGEK-LGLDPKVLFEIANT  203 (290)
T ss_pred             C------EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHHHHHHHHHH
T ss_conf             5------6866888875157899889999989999999999986-17888899999730