HHsearch alignment for GI: 254780716 and conserved domain: TIGR01724
>TIGR01724 hmd_rel coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase-related protein; InterPro: IPR010063 This entry identifies a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase, (IPR010062 from INTERPRO). All members are restricted to archaeal methanogens and their function is unknown..
Probab=94.20 E-value=0.44 Score=27.52 Aligned_cols=152 Identities=13% Similarity=0.148 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCC
Q ss_conf 11688999997898599973998999999971221127840328989998605778899997699069999999997207
Q gi|254780716|r 14 MGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQLIDKLKPLL 93 (475)
Q Consensus 14 MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~vi~~l~~~l 93 (475)
T Consensus 31 GG~~ma~efa~aGhdv~l~eP~~~~~~d~~W~-~ve~aGv~v~~~d~eaa---~~~e~~vlftPfG~~t~~ia~~i~~~~ 106 (341)
T TIGR01724 31 GGSRMAIEFAKAGHDVVLAEPNREVLSDDLWK-KVEDAGVKVVSDDVEAA---KHGEIHVLFTPFGKATLSIAKTIIEHV 106 (341)
T ss_pred CCHHHHHHHHHCCCCEEEECCCHHHHHHHHHH-HHHHCCCEEEEHHHHHH---CCCCEEEEECCCCHHHHHHHHHHHHHC
T ss_conf 60488998874287068607761231146777-78751664530135433---017557886353178999999999746
Q ss_pred CCCCEEEECCCCCHHHHHHH-HH--HHHHC--CCCEE-CCCCCCCCCCCCCCCEEEEECC---------HHHHHHHHHHH
Q ss_conf 89989996798657899999-99--99847--99430-6754676000356843788454---------89998889999
Q gi|254780716|r 94 SPEDILLDGGNSHFCDTQIR-SL--QLSEK--GIYFI-GIGVSGGVKGARSGASLMVGGN---------EKAYNRVENIL 158 (475)
Q Consensus 94 ~~g~iiID~sts~~~~t~~~-~~--~l~~k--gi~fi-d~pVSGG~~gA~~G~slMvGG~---------~~~~~~~~piL 158 (475)
T Consensus 107 Pe~~~i~ntCt~~~~vly~~le~~l~~~r~dvG~ssmhP~~vPGtP~~~----~y~i~G~~~~~~~~at~~q~~~~~el~ 182 (341)
T TIGR01724 107 PENAVICNTCTVSPVVLYYSLEKILRLKRKDVGISSMHPAAVPGTPQHG----HYVIGGKATEGKELATEEQIKKLVELA 182 (341)
T ss_pred CCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC----EEEEECCCCCHHHHHHHHHHHHHHHHH
T ss_conf 8653662024333368888878887432210320013566788988765----267505420012212589999999999
Q ss_pred HHHHCCCCCCCEEEEECCCCHH
Q ss_conf 9875015678618985698746
Q gi|254780716|r 159 LSISAKYQNSPCCALLGPDGSG 180 (475)
Q Consensus 159 ~~iaak~~~~~cv~y~G~~GsG 180 (475)
T Consensus 183 ~s~Gk-------~~y~~Padv~ 197 (341)
T TIGR01724 183 KSVGK-------KAYVVPADVS 197 (341)
T ss_pred HHCCC-------CCEECCCHHH
T ss_conf 84187-------4301032036