HHsearch alignment for GI: 254780716 and conserved domain: TIGR01724

>TIGR01724 hmd_rel coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase-related protein; InterPro: IPR010063 This entry identifies a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase, (IPR010062 from INTERPRO). All members are restricted to archaeal methanogens and their function is unknown..
Probab=94.20  E-value=0.44  Score=27.52  Aligned_cols=152  Identities=13%  Similarity=0.148  Sum_probs=92.3

Q ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCC
Q ss_conf             11688999997898599973998999999971221127840328989998605778899997699069999999997207
Q gi|254780716|r   14 MGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISGLSQKVIVTKNLEQMVEAVCKPRKILMMVTDGDPVDQLIDKLKPLL   93 (475)
Q Consensus        14 MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~~~~~~~~~~s~~e~v~~l~~pr~Iil~vp~g~~v~~vi~~l~~~l   93 (475)
T Consensus        31 GG~~ma~efa~aGhdv~l~eP~~~~~~d~~W~-~ve~aGv~v~~~d~eaa---~~~e~~vlftPfG~~t~~ia~~i~~~~  106 (341)
T TIGR01724        31 GGSRMAIEFAKAGHDVVLAEPNREVLSDDLWK-KVEDAGVKVVSDDVEAA---KHGEIHVLFTPFGKATLSIAKTIIEHV  106 (341)
T ss_pred             CCHHHHHHHHHCCCCEEEECCCHHHHHHHHHH-HHHHCCCEEEEHHHHHH---CCCCEEEEECCCCHHHHHHHHHHHHHC
T ss_conf             60488998874287068607761231146777-78751664530135433---017557886353178999999999746


Q ss_pred             CCCCEEEECCCCCHHHHHHH-HH--HHHHC--CCCEE-CCCCCCCCCCCCCCCEEEEECC---------HHHHHHHHHHH
Q ss_conf             89989996798657899999-99--99847--99430-6754676000356843788454---------89998889999
Q gi|254780716|r   94 SPEDILLDGGNSHFCDTQIR-SL--QLSEK--GIYFI-GIGVSGGVKGARSGASLMVGGN---------EKAYNRVENIL  158 (475)
Q Consensus        94 ~~g~iiID~sts~~~~t~~~-~~--~l~~k--gi~fi-d~pVSGG~~gA~~G~slMvGG~---------~~~~~~~~piL  158 (475)
T Consensus       107 Pe~~~i~ntCt~~~~vly~~le~~l~~~r~dvG~ssmhP~~vPGtP~~~----~y~i~G~~~~~~~~at~~q~~~~~el~  182 (341)
T TIGR01724       107 PENAVICNTCTVSPVVLYYSLEKILRLKRKDVGISSMHPAAVPGTPQHG----HYVIGGKATEGKELATEEQIKKLVELA  182 (341)
T ss_pred             CCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC----EEEEECCCCCHHHHHHHHHHHHHHHHH
T ss_conf             8653662024333368888878887432210320013566788988765----267505420012212589999999999


Q ss_pred             HHHHCCCCCCCEEEEECCCCHH
Q ss_conf             9875015678618985698746
Q gi|254780716|r  159 LSISAKYQNSPCCALLGPDGSG  180 (475)
Q Consensus       159 ~~iaak~~~~~cv~y~G~~GsG  180 (475)
T Consensus       183 ~s~Gk-------~~y~~Padv~  197 (341)
T TIGR01724       183 KSVGK-------KAYVVPADVS  197 (341)
T ss_pred             HHCCC-------CCEECCCHHH
T ss_conf             84187-------4301032036