HHsearch alignment for GI: 254780716 and conserved domain: TIGR02356
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF; InterPro: IPR012731 Members of the HesA/MoeB/ThiF family of proteins (IPR000594 from INTERPRO) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees. The Escherichia coli ThiF and MoeB proteins are seemingly more closely related than the E. coli ThiF and Campylobacter (for example) ThiF. This entry represents the more widely distributed clade of ThiF proteins as found in E. coli..
Probab=95.87 E-value=0.078 Score=33.08 Aligned_cols=124 Identities=16% Similarity=0.184 Sum_probs=83.8
Q ss_pred CCEEEEEECCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHC--C-CCCC-CCEECCCHHHHHHHCCCCCEEEEECC
Q ss_conf 880569815711168899999789-85999739989999999712--2-1127-84032898999860577889999769
Q gi|254780716|r 3 QADIGIIGLGSMGSNLSLNILDKG-FRLAVYNKDFELTDVFIKKI--S-GLSQ-KVIVTKNLEQMVEAVCKPRKILMMVT 77 (475)
Q Consensus 3 k~~IGiIGLG~MG~~mA~nL~~~G-~~V~vydr~~~~~~~l~~~~--~-~~~~-~~~~~~s~~e~v~~l~~pr~Iil~vp 77 (475)
T Consensus 21 ~s~VLiiGaGgLGs~~~~~LA~AGVG~i~i~D~D~V~~SNLqRQ~Lf~e~Dv~~~~pK~e~aa~~l~~LN-~~i~v~a~~ 99 (210)
T TIGR02356 21 ASHVLIIGAGGLGSPAALYLAAAGVGTITIVDDDHVDLSNLQRQILFAEEDVGTLRPKVEAAAERLRELN-SDIRVTALK 99 (210)
T ss_pred HCCEEEEEECHHHHHHHHHHHHCCCCEEEEEECCEECHHHCHHHHHHCHHHHHCCCHHHHHHHHHHHHHC-CCCEEEEEE
T ss_conf 0865999726145689999982888378998516770101205543032442013158999999998538-896899854
Q ss_pred CHHHHHHHHHHHHHCCCCCC--EEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCCC
Q ss_conf 90699999999972078998--99967986578999999999847994306754676
Q gi|254780716|r 78 DGDPVDQLIDKLKPLLSPED--ILLDGGNSHFCDTQIRSLQLSEKGIYFIGIGVSGG 132 (475)
Q Consensus 78 ~g~~v~~vi~~l~~~l~~g~--iiID~sts~~~~t~~~~~~l~~kgi~fid~pVSGG 132 (475)
T Consensus 100 ~-~vt~~~~~~~i~---~~DPdlVlDc~-DNf~tryliNdaC~~~~~PlI~aavvG~ 151 (210)
T TIGR02356 100 E-RVTAENLELLIE---NVDPDLVLDCT-DNFATRYLINDACQALGIPLISAAVVGF 151 (210)
T ss_pred E-CCCHHHHHHHHH---CCCCCEEEECC-CCHHHHHHHHHHHHHHCCCEEEEEEEEE
T ss_conf 2-027799999962---38996896156-6877889999999984798699988763