HHsearch alignment for GI: 254780716 and conserved domain: TIGR02717
>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain; InterPro: IPR014089 This group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which they have been characterised , , . In most species this protein is bifunctional, existing as fused alpha-beta domains. In Pyrococcus and related species, however, the domains exist as separate polypeptides. This entry represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. One of these (along with its beta-domain partner) was characterised as ACS-II showing specificity for phenylacetyl-CoA . This entry excludes non-ACS-I paralogs. .
Probab=95.53 E-value=0.085 Score=32.78 Aligned_cols=252 Identities=17% Similarity=0.232 Sum_probs=165.9
Q ss_pred EEEEEEC----CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCC-CCCC-CEECCCHHHH-HHHCCCCCEEEEECC
Q ss_conf 0569815----7111688999997898599973998999999971221-1278-4032898999-860577889999769
Q gi|254780716|r 5 DIGIIGL----GSMGSNLSLNILDKGFRLAVYNKDFELTDVFIKKISG-LSQK-VIVTKNLEQM-VEAVCKPRKILMMVT 77 (475)
Q Consensus 5 ~IGiIGL----G~MG~~mA~nL~~~G~~V~vydr~~~~~~~l~~~~~~-~~~~-~~~~~s~~e~-v~~l~~pr~Iil~vp 77 (475)
T Consensus 9 SvAVIGAS~~~gKVGy~i~~NL~~~Gy~G~~YPVNpk~---------~i~i~Gr~k~Y~~~~~~dP~~VD---LAVivvP 76 (457)
T TIGR02717 9 SVAVIGASRDEGKVGYAIMKNLIEGGYKGKIYPVNPKA---------GIEILGRVKAYPSVLEIDPDEVD---LAVIVVP 76 (457)
T ss_pred CEEEECCCCCCCCCCHHHHEEEECCCCEEEEEEECCCC---------CEEEEECCCCCCCHHHCCCCCCC---EEEEECC
T ss_conf 15897124889851002200000378303687622788---------71463011457871114899734---7999728
Q ss_pred CHHHHHHHHHHHHHCCCCCCEEEECC-----CCCHHHHHHHHHHHHHCCCCEECCCCC--------------------CC
Q ss_conf 90699999999972078998999679-----865789999999998479943067546--------------------76
Q gi|254780716|r 78 DGDPVDQLIDKLKPLLSPEDILLDGG-----NSHFCDTQIRSLQLSEKGIYFIGIGVS--------------------GG 132 (475)
Q Consensus 78 ~g~~v~~vi~~l~~~l~~g~iiID~s-----ts~~~~t~~~~~~l~~kgi~fid~pVS--------------------GG 132 (475)
T Consensus 77 a-~~vp~v~eECG~KGVkg~vvI~AGF~E~G~eG~~LE~~l~~~a~kYg~Rl~GPNclG~~nt~~~lNAtFA~~~p~~G~ 155 (457)
T TIGR02717 77 A-KLVPQVVEECGEKGVKGAVVITAGFKEVGEEGAELEQKLVEIARKYGMRLLGPNCLGIINTEIKLNATFAPTMPKKGG 155 (457)
T ss_pred H-HHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCEEEEECCCHHHHHCCCCCCCCCCC
T ss_conf 5-679999999861795189997148645316789999999999976788177673622581440211001357889887
Q ss_pred -----CCCC------------CCCCEEEEE-CCHHHHHHHHHHHHHHHCCCC--------------------------CC
Q ss_conf -----0003------------568437884-548999888999998750156--------------------------78
Q gi|254780716|r 133 -----VKGA------------RSGASLMVG-GNEKAYNRVENILLSISAKYQ--------------------------NS 168 (475)
Q Consensus 133 -----~~gA------------~~G~slMvG-G~~~~~~~~~piL~~iaak~~--------------------------~~ 168 (475)
T Consensus 156 Iaf~SQSGAl~~a~Ldwa~~~~vGfS~~VS~GNkAD~~e~-Dlley~~~D~~T~~I~~Y~Eg~~DG~~Fl~~A~~~s~~K 234 (457)
T TIGR02717 156 IAFISQSGALLTALLDWAEKNGVGFSYFVSLGNKADIDES-DLLEYLADDPDTKVILLYLEGIKDGRKFLKTAKEISKKK 234 (457)
T ss_pred EEEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCEECCHH-HHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCC
T ss_conf 7789712589999999998727813477826741111657-788898539894089997178704168999988863059
Q ss_pred CE-EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 61-89856987467898877678788899989999999-96428997899999986068844307999999999740567
Q gi|254780716|r 169 PC-CALLGPDGSGHFVKMIHNGIEYANMQLIADIYGIL-RDSLNKNPLEISHLFSKWDTGKLSSYLIKITAEILSSSDTI 246 (475)
Q Consensus 169 ~c-v~y~G~~GsGh~vKMVhNgIey~~mq~iaE~~~~l-~~~~~~~~~~i~~vf~~w~~~~~~syLl~i~~~il~~k~~~ 246 (475)
T Consensus 235 Piv~lKsG~s~~GakAA~SHTGaLAGs----~~~y~aaf~q~G~iRa~~~~ELfd--------------~A~~L~~~~~~ 296 (457)
T TIGR02717 235 PIVVLKSGTSEAGAKAASSHTGALAGS----DEAYDAAFKQAGVIRADSIEELFD--------------LARLLSNQPLP 296 (457)
T ss_pred CEEEEECCCCHHHHHHHHHCCCHHHHH----HHHHHHHHCCCCEEEEECHHHHHH--------------HHHHHHCCCCC
T ss_conf 889993688834567652102313366----899998743014388701778899--------------99998358989
Q ss_pred -CCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf -9995200102333658716778988775178885146777888775
Q gi|254780716|r 247 -TGMPIIDVICDKASQKGTGIRSIIEGHKLSSSMTITETAIFARNLS 292 (475)
Q Consensus 247 -~g~~lid~i~d~~~~kgTg~Wt~~~a~~lgvp~p~i~~av~aR~~S 292 (475)
T Consensus 297 ~~g----~~~~IiTN~GG~Gvia~D~~~~~Gl~L~~~~~~t~~~L~~ 339 (457)
T TIGR02717 297 PKG----NRVAIITNAGGPGVIATDACEEVGLELAELSEKTKEKLRN 339 (457)
T ss_pred CCC----CEEEEEECCCCHHHHHHHHHHHCCCEEECCCHHHHHHHHH
T ss_conf 988----7699997896167787656777497455585899999997