HHsearch alignment for GI: 254780716 and conserved domain: cd05291
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=96.20 E-value=0.091 Score=32.59 Aligned_cols=100 Identities=18% Similarity=0.317 Sum_probs=59.9
Q ss_pred EEEEEECCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHCC---C-CCCCC-EECCCHHHHHHHCCCCCEEEEEC-
Q ss_conf 05698157111688999997898--59997399899999997122---1-12784-03289899986057788999976-
Q gi|254780716|r 5 DIGIIGLGSMGSNLSLNILDKGF--RLAVYNKDFELTDVFIKKIS---G-LSQKV-IVTKNLEQMVEAVCKPRKILMMV- 76 (475)
Q Consensus 5 ~IGiIGLG~MG~~mA~nL~~~G~--~V~vydr~~~~~~~l~~~~~---~-~~~~~-~~~~s~~e~v~~l~~pr~Iil~v- 76 (475)
T Consensus 2 KI~IIGaG~VG~~~a~~l~~~~l~~el~L~Di~~~~a~G~a~DL~~~~~~~~~~~~i~~~~~~~----~~~aDvvVitAG 77 (306)
T cd05291 2 KVVIIGAGHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDYSD----CKDADIVVITAG 77 (306)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHH----HCCCCEEEECCC
T ss_conf 5999996988999999998579987799981898701769998870133059973996088788----478999999067
Q ss_pred -C-------------CHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHH
Q ss_conf -9-------------9069999999997207899899967986578999
Q gi|254780716|r 77 -T-------------DGDPVDQLIDKLKPLLSPEDILLDGGNSHFCDTQ 111 (475)
Q Consensus 77 -p-------------~g~~v~~vi~~l~~~l~~g~iiID~sts~~~~t~ 111 (475)
T Consensus 78 ~~rk~g~~R~dLl~~N~~I~k~i~~~i~~~-~p~aivivvtN--PvDvm 123 (306)
T cd05291 78 APQKPGETRLDLLEKNAKIMKSIVPKIKAS-GFDGIFLVASN--PVDVI 123 (306)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHC-CCCCEEEEECC--CHHHH
T ss_conf 667999987899997899999999998722-99718999358--16789